RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 OR51A4Q8NGJ6 313 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 OR10AC1Q8NH08 325 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 CHPT1Q8WUD6 406 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 RNFT2Q96EX2 444 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 KIRREL1Q96J84 757 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 NOL4LQ96MY1 436 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-202ENST00000562722 MCRIP2Q9BUT9 160 aaKnown RBP10.3□□□□□ -0.76
SF3B3-202ENST00000562722 GABARAPL3Q9BY60 117 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 ZCCHC4Q9H5U6 513 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 RHOFQ9HBH0 211 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 CALYQ9NYX4 217 aa10.3□□□□□ -0.76
SF3B3-202ENST00000562722 A0A087X0M5 115 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 A0A1B0GX30 115 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 SAC3D1A6NKF1 404 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 H0YJX3 145 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 J3QLW9 94 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 MT-ND2P03891 347 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 ZNF19P17023 458 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 THBS3P49746 956 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 GNG10P50151 68 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 MADCAM1Q13477 382 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 LPCAT4Q643R3 524 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 RNF166Q96A37 237 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-202ENST00000562722 WWC2-AS2Q96NR7 200 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 B9D2Q9BPU9 175 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 KIF25Q9UIL4 384 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 LINC00527Q9UJ94 153 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 OAZ3Q9UMX2 235 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 MYRFQ9Y2G1 1151 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 DNAH9Q9NYC9 4486 aa10.29□□□□□ -0.76
SF3B3-202ENST00000562722 J3QR06 171 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 DBTP11182 482 aaKnown RBP10.28□□□□□ -0.76
SF3B3-202ENST00000562722 C21orf33P30042 268 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-202ENST00000562722 MTNR1BP49286 362 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 CCR9P51686 369 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 C1orf146Q5VVC0 180 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 FDX2Q6P4F2 183 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 C18orf65Q6ZTR6 163 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 SLC35E3Q7Z769 313 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 THNSL2Q86YJ6 484 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 FOXRED2Q8IWF2 684 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 C5orf56Q8N8D9 126 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 OR13A1Q8NGR1 328 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 OR10X1Q8NGY0 326 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 RFESDQ8TAC1 157 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 MRPL48Q96GC5 212 aaKnown RBP10.28□□□□□ -0.76
SF3B3-202ENST00000562722 C4orf36Q96KX1 117 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 GPER1Q99527 375 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 BARHL1Q9BZE3 327 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 ZFP57Q9NU63 452 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 IDI2-AS1Q9NZ38 188 aa10.28□□□□□ -0.76
SF3B3-202ENST00000562722 ZMAT5Q9UDW3 170 aaKnown RBP10.28□□□□□ -0.76
SF3B3-202ENST00000562722 NBEAL2Q6ZNJ1 2754 aa10.27□□□□□ -0.76
SF3B3-202ENST00000562722 A0A1W2PPI3 338 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 SULT1B1O43704 296 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 IL1AP01583 271 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 IGKV1D-33P01593 117 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 IGKV1-33P01594 117 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 SLC6A1P30531 599 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 MYCNOSP40205 109 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 RAB7AP51149 207 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 DGCR2P98153 550 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 ALKBH1Q13686 389 aaKnown RBP10.27□□□□□ -0.77
SF3B3-202ENST00000562722 DIAPH2-AS1Q14236 149 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 CDK5R1Q15078 307 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 KISS1Q15726 138 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 ZSCAN26Q16670 478 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 ZNF691Q5VV52 312 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 SATL1Q86VE3 508 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 OR51T1Q8NGJ9 327 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 OR5D14Q8NGL3 314 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 HAVCR2Q8TDQ0 301 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 MRGPRDQ8TDS7 321 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 TSEN15Q8WW01 171 aaKnown RBP10.27□□□□□ -0.77
SF3B3-202ENST00000562722 TRUB1Q8WWH5 349 aaKnown RBP10.27□□□□□ -0.77
SF3B3-202ENST00000562722 TFAP2CQ92754 450 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 PELI1Q96FA3 418 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 CPNE2Q96FN4 548 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-202ENST00000562722 DUX3Q96PT4 197 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 FAM192AQ9GZU8 254 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 DHDHQ9UQ10 334 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 PSG11Q9UQ72 335 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 ORC6Q9Y5N6 252 aa10.27□□□□□ -0.77
SF3B3-202ENST00000562722 A0A1W2PPE3 182 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FAM90A18PA6NE21 464 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FAM90A16PA6NEW6 464 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FAM90A20PA6NIJ5 464 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 SNTNA6NMZ2 147 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 OR4C45A6NMZ5 311 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FAM90A9PA6NNJ1 464 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 NCBP2LA6PVI3 153 aaKnown RBP10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FAM90A12PA8MX19 464 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FAM90A5PA8MXJ8 464 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 MAGEB3O15480 346 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FGF16O43320 207 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FAM90A15PP0C7V4 464 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FAM90A13PP0C7W8 464 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FAM90A14PP0C7W9 464 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 FAM90A24PP0C7X0 464 aa10.26□□□□□ -0.77
SF3B3-202ENST00000562722 ZP1P60852 638 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 266.3 ms