RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 FGD3Q5JSP0 725 aa4□□□□□ -1.77
HERC1-213ENST00000561359 TOR2AQ5JU69 321 aa4□□□□□ -1.77
HERC1-213ENST00000561359 HEPN1Q6WQI6 88 aa4□□□□□ -1.77
HERC1-213ENST00000561359 RRM2BQ7LG56 351 aa4□□□□□ -1.77
HERC1-213ENST00000561359 SPATA24Q86W54 205 aa4□□□□□ -1.77
HERC1-213ENST00000561359 IFT20Q8IY31 132 aa4□□□□□ -1.77
HERC1-213ENST00000561359 Q8N9W7 124 aa4□□□□□ -1.77
HERC1-213ENST00000561359 OR52L1Q8NGH7 329 aa4□□□□□ -1.77
HERC1-213ENST00000561359 SLAMF6Q96DU3 332 aa4□□□□□ -1.77
HERC1-213ENST00000561359 PGAM5Q96HS1 289 aa4□□□□□ -1.77
HERC1-213ENST00000561359 ERMAPQ96PL5 475 aaPredicted RBP4□□□□□ -1.77
HERC1-213ENST00000561359 NMNAT3Q96T66 252 aa4□□□□□ -1.77
HERC1-213ENST00000561359 HSPB9Q9BQS6 159 aa4□□□□□ -1.77
HERC1-213ENST00000561359 THAP7Q9BT49 309 aaPredicted RBP4□□□□□ -1.77
HERC1-213ENST00000561359 ADI1Q9BV57 179 aa4□□□□□ -1.77
HERC1-213ENST00000561359 FNDC11Q9BVV2 318 aa4□□□□□ -1.77
HERC1-213ENST00000561359 TINAGL1Q9GZM7 467 aaPredicted RBP4□□□□□ -1.77
HERC1-213ENST00000561359 CHST6Q9GZX3 395 aa4□□□□□ -1.77
HERC1-213ENST00000561359 GAL3ST2Q9H3Q3 398 aa4□□□□□ -1.77
HERC1-213ENST00000561359 FN3KQ9H479 309 aa4□□□□□ -1.77
HERC1-213ENST00000561359 PPCSQ9HAB8 311 aa4□□□□□ -1.77
HERC1-213ENST00000561359 MRPL22Q9NWU5 206 aaKnown RBP4□□□□□ -1.77
HERC1-213ENST00000561359 RHCGQ9UBD6 479 aa4□□□□□ -1.77
HERC1-213ENST00000561359 BAG5Q9UL15 447 aa4□□□□□ -1.77
HERC1-213ENST00000561359 AMMECR1Q9Y4X0 333 aaPredicted RBP4□□□□□ -1.77
HERC1-213ENST00000561359 TRGV10A0A0A0MS01 117 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 TRBV5-3A0A0A0MS03 114 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 IGHV3-72A0A0B4J1Y9 119 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 LOC105371267A0A1B0GV96 52 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 A0A1W2PPI3 338 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 TVP23AA6NH52 213 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 OR11H12B2RN74 326 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 G3V318 75 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 J3QT63 122 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 M0R2N4 97 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 DLGAP1O14490 977 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 UBDO15205 165 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 TXNDC12O95881 172 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 HSPB1P04792 205 aaKnown RBP3.99□□□□□ -1.77
HERC1-213ENST00000561359 IFNA4P05014 189 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 LYNP07948 512 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 LGALS1P09382 135 aaKnown RBP3.99□□□□□ -1.77
HERC1-213ENST00000561359 KITP10721 976 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 GABRR1P24046 479 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 NFYBP25208 207 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 PEX2P28328 305 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 CD34P28906 385 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 PYCR1P32322 319 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 YAP1P46937 504 aaKnown RBP3.99□□□□□ -1.77
HERC1-213ENST00000561359 HAAOP46952 286 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 ZNF121P58317 390 aaPredicted RBP3.99□□□□□ -1.77
HERC1-213ENST00000561359 GRB2P62993 217 aaKnown RBP3.99□□□□□ -1.77
HERC1-213ENST00000561359 MADCAM1Q13477 382 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 TRAM2Q15035 370 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 PAGE3Q5JUK9 113 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 TBPL2Q6SJ96 375 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 DPY19L2P2Q6ZN68 376 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 MOB3CQ70IA8 216 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 MOB3BQ86TA1 216 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 ZBTB46Q86UZ6 589 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 RNF113BQ8IZP6 322 aaKnown RBP3.99□□□□□ -1.77
HERC1-213ENST00000561359 OR8H3Q8N146 312 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 PQLC1Q8N2U9 271 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 Q8N402 240 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 TMEM217Q8N7C4 229 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 ZNF645Q8N7E2 425 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 OR5A2Q8NGI9 324 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 OR4D6Q8NGJ1 314 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 OR4K13Q8NH42 304 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 TSPEARQ8WU66 669 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 SNX22Q96L94 193 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 PRRC1Q96M27 445 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 GPX7Q96SL4 187 aaPredicted RBP3.99□□□□□ -1.77
HERC1-213ENST00000561359 NEURL2Q9BR09 285 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 WFDC10AQ9H1F0 79 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 RGCCQ9H4X1 137 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 PLEKHA1Q9HB21 404 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 SLC2A8Q9NY64 477 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 OR6C3Q9NZP0 311 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 ZNF319Q9P2F9 582 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 COPS3Q9UNS2 423 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 SLC7A11Q9UPY5 501 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 POLDIP2Q9Y2S7 368 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 UBE2J1Q9Y385 318 aaPredicted RBP3.99□□□□□ -1.77
HERC1-213ENST00000561359 FBXO7Q9Y3I1 522 aa3.99□□□□□ -1.77
HERC1-213ENST00000561359 APOBP04114 4563 aaKnown RBP3.99□□□□□ -1.77
HERC1-213ENST00000561359 FLG2Q5D862 2391 aaPredicted RBP3.98□□□□□ -1.77
HERC1-213ENST00000561359 LRP1BQ9NZR2 4599 aa3.98□□□□□ -1.77
HERC1-213ENST00000561359 A0A087WUU8 490 aa3.98□□□□□ -1.77
HERC1-213ENST00000561359 IZUMO1RA6ND01 250 aa3.98□□□□□ -1.77
HERC1-213ENST00000561359 OR5B21A6NL26 309 aa3.98□□□□□ -1.77
HERC1-213ENST00000561359 ARPC1BO15143 372 aaKnown RBP3.98□□□□□ -1.77
HERC1-213ENST00000561359 NOS1APO75052 506 aaPredicted RBP3.98□□□□□ -1.77
HERC1-213ENST00000561359 IGHV3-11P01762 117 aa3.98□□□□□ -1.77
HERC1-213ENST00000561359 IGHV3-7P01780 117 aa3.98□□□□□ -1.77
HERC1-213ENST00000561359 APOC1P02654 83 aa3.98□□□□□ -1.77
HERC1-213ENST00000561359 CD7P09564 240 aa3.98□□□□□ -1.77
HERC1-213ENST00000561359 INAFM2P0DMQ5 153 aa3.98□□□□□ -1.77
HERC1-213ENST00000561359 SLC2A2P11168 524 aaPredicted RBP3.98□□□□□ -1.77
HERC1-213ENST00000561359 PSKH1P11801 424 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms