RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 CRYBB2P43320 205 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 MAP2K4P45985 399 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 EMX1Q04741 257 aaPredicted RBP4.94□□□□□ -1.62
LRRC28-220ENST00000561253 KRTAP1-1Q07627 177 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 ZNF154Q13106 437 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 MED21Q13503 144 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 SPHARQ15513 63 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 MPPED2Q15777 294 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 UBE2V2Q15819 145 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 SSX1Q16384 188 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 MOGQ16653 247 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 ZNF181Q2M3W8 571 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 TMEM244Q5VVB8 128 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 UBE2UQ5VVX9 321 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 RPL22L1Q6P5R6 122 aaKnown RBP4.94□□□□□ -1.62
LRRC28-220ENST00000561253 ZNF773Q6PK81 442 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 UNQ9370/PRO34162Q6UXP9 181 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 TMPRSS11AQ6ZMR5 421 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 UTS2BQ765I0 119 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 FAM220AQ7Z4H9 259 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 LYPD6Q86Y78 171 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 STX19Q8N4C7 294 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 ZFP41Q8N8Y5 198 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 CCDC54Q8NEL0 328 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 TSPAN14Q8NG11 270 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 OR2Z1Q8NG97 314 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 OR13C5Q8NGS8 318 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 C10orf105Q8TEF2 133 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 ITLN1Q8WWA0 313 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 OR5P3Q8WZ94 311 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 GHSRQ92847 366 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 MYDGFQ969H8 173 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 C10orf35Q96D05 121 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 MRPL48Q96GC5 212 aaKnown RBP4.94□□□□□ -1.62
LRRC28-220ENST00000561253 FAM71F1Q96KD3 344 aaPredicted RBP4.94□□□□□ -1.62
LRRC28-220ENST00000561253 OR2V2Q96R30 315 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 CHST5Q9GZS9 411 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 SLC22A4Q9H015 551 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 RAB1BQ9H0U4 201 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 Q9H521 79 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 ZNF696Q9H7X3 374 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 DYNLRB1Q9NP97 96 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 ISYNA1Q9NPH2 558 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 ACOT13Q9NPJ3 140 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 ZNF275Q9NSD4 429 aaPredicted RBP4.94□□□□□ -1.62
LRRC28-220ENST00000561253 TMEM100Q9NV29 134 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 HHLA2Q9UM44 414 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 ERGIC3Q9Y282 383 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 N6AMT1Q9Y5N5 214 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 MPC1Q9Y5U8 109 aa4.94□□□□□ -1.62
LRRC28-220ENST00000561253 C2CD3Q4AC94 2353 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 IGHV4-61A0A0C4DH41 118 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 IGHV1-69-2A0A0G2JMI3 117 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 TRBV2A0A0J9YWF9 115 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 PQLC2LA1A4F0 135 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 ANKRD61A6NGH8 418 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 GGT3PA6NGU5 568 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 A6NIN4 97 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 ZNF850A8MQ14 1090 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 H3BSH0 61 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 SYT7O43581 403 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 MTRF1O75570 445 aaKnown RBP4.93□□□□□ -1.62
LRRC28-220ENST00000561253 FCN3O75636 299 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 GPX5O75715 221 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 FSTL3O95633 263 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 LHBP01229 141 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 SMIM18P0DKX4 95 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 CD37P11049 281 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 IGFBP3P17936 291 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-220ENST00000561253 MPZP25189 248 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 GBX2P52951 348 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-220ENST00000561253 TAS2R43P59537 309 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 KRTAP10-11P60412 298 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 TNFAIP6P98066 277 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-220ENST00000561253 RIPPLY1Q0D2K3 151 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 MLLT11Q13015 90 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-220ENST00000561253 PRDX4Q13162 271 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 GPR50Q13585 617 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 INSL4Q14641 139 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 ODF4Q2M2E3 257 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 CEACAM21Q3KPI0 293 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 DMRTC1Q5HYR2 192 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 CLVS2Q5SYC1 327 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 SYT6Q5T7P8 510 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-220ENST00000561253 PRAMEF6Q5VXH4 476 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 SHEQ5VZ18 495 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 TEX38Q6PEX7 206 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 CD200R1LQ6Q8B3 271 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 TMEM91Q6ZNR0 172 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 PHC2Q8IXK0 858 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 CIARTQ8N365 385 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-220ENST00000561253 SPERTQ8NA61 448 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 OR5AK2Q8NH90 309 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 RDH5Q92781 318 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 MYCBPQ99417 103 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-220ENST00000561253 ADAT1Q9BUB4 502 aaKnown RBP4.93□□□□□ -1.62
LRRC28-220ENST00000561253 PAPOLGQ9BWT3 736 aaKnown RBP4.93□□□□□ -1.62
LRRC28-220ENST00000561253 MND1Q9BWT6 205 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 OR51I2Q9H344 312 aa4.93□□□□□ -1.62
LRRC28-220ENST00000561253 ENPP5Q9UJA9 477 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms