RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 SEC22AQ96IW7 307 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 PLK3Q9H4B4 646 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 TMEM165Q9HC07 324 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 Q9N2K0 584 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 DCAF16Q9NXF7 216 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 PIPOXQ9P0Z9 390 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 MGAT4AQ9UM21 535 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 EDARQ9UNE0 448 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 USP24Q9UPU5 2620 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 HRNRQ86YZ3 2850 aaPredicted RBP9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 IGLV3-9A0A075B6K5 115 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A10PA6NDY2 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A18PA6NE21 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A16PA6NEW6 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A20PA6NIJ5 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A8PA6NJQ4 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A7PA6NKC0 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A22PA8MWA6 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A12PA8MX19 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A5PA8MXJ8 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A23PA8MXZ1 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 G3V3Q6 166 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 C1QBP02746 253 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A15PP0C7V4 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A13PP0C7W8 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A14PP0C7W9 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM90A24PP0C7X0 464 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 PTAFRP25105 342 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 CD34P28906 385 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 GZMKP49863 264 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM53AQ6NSI3 398 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 ACP7Q6ZNF0 438 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 POC1AQ8NBT0 407 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 CA5BP1Q8WTZ4 195 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 ALX4Q9H161 411 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 IGKV1-6A0A0C4DH72 117 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 SUPT4H1P63272 117 aaKnown RBP9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 AESQ08117 197 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 ADIPOQQ15848 244 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 PHLDA2Q53GA4 152 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 LYG2Q86SG7 212 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 OR11L1Q8NGX0 322 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 MRPL24Q96A35 216 aaKnown RBP9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 COQ3Q9NZJ6 369 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 VPS13CQ709C8 3753 aa9.16□□□□□ -0.94
SNRPA1-211ENST00000560433 SPTAN1Q13813 2472 aaKnown RBP9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 MPTX1A8MV57 137 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 SH2D1BO14796 132 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 IGHV1-46P01743 117 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 AADACP22760 399 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 TUBG1P23258 451 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 DNASE1P24855 282 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 FPR2P25090 351 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 SSTR2P30874 369 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 CHRNB4P30926 498 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 IFITM2Q01629 132 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 IL13RA2Q14627 380 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 ZNF146Q15072 292 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 ZMYND11Q15326 602 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 GRK1Q15835 563 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 SP6Q3SY56 376 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 LRRC37A5PQ49AS3 106 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 LY6G6FQ5SQ64 297 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 LAMTOR1Q6IAA8 161 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 CLEC18BQ6UXF7 455 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 Q8IYB0 196 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 GCSAMQ8N6F7 178 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 ASCC1Q8N9N2 400 aaKnown RBP9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 KIRREL1Q96J84 757 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 MEGF10Q96KG7 1140 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 TUBG2Q9NRH3 451 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 HSPB11Q9Y547 144 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 H3BUI4 141 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 TSC22D2O75157 780 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 ADAP1O75689 374 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 CYB5R3P00387 301 aaPredicted RBP9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 GABRA2P47869 451 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 ASCL1P50553 236 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 COL10A1Q03692 680 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 C3orf36Q3SXR2 165 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 PEG10Q86TG7 708 aaKnown RBP9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 DEFB108BQ8NET1 73 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 TLNRD1Q9H1K6 362 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 HES4Q9HCC6 221 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 TRAPPC2LQ9UL33 140 aa9.15□□□□□ -0.94
SNRPA1-211ENST00000560433 DSCAMO60469 2012 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 SELLP14151 372 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 SELENOVP59797 346 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 TNFAIP6P98066 277 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 ANKRD55Q3KP44 614 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 TMEM128Q5BJH2 165 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DHRS11Q6UWP2 260 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DMRTC2Q8IXT2 367 aaPredicted RBP9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 SPICQ8N5J4 248 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 CD177Q8N6Q3 437 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 SPERTQ8NA61 448 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 DCTN5Q9BTE1 182 aa9.14□□□□□ -0.95
SNRPA1-211ENST00000560433 FXYD6Q9H0Q3 95 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms