RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 SLC36A1Q7Z2H8 476 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 MUC20Q8N307 709 aaPredicted RBP5.4□□□□□ -1.54
SPG11-221ENST00000560299 ZNF561Q8N587 486 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 ASCC1Q8N9N2 400 aaKnown RBP5.4□□□□□ -1.54
SPG11-221ENST00000560299 TMEM229BQ8NBD8 167 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 SUMF2Q8NBJ7 301 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 NUDCD2Q8WVJ2 157 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 RAB1CQ92928 201 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 SNX22Q96L94 193 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 CCL19Q99731 98 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 SULT4A1Q9BR01 284 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 ST6GALNAC5Q9BVH7 336 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 GSX2Q9BZM3 304 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 DNTTIP1Q9H147 329 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 WDR13Q9H1Z4 485 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 ZNF665Q9H7R5 613 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 RAB9BQ9NP90 201 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 RCC2Q9P258 522 aaKnown RBP5.4□□□□□ -1.54
SPG11-221ENST00000560299 COPZ2Q9P299 210 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 AK3Q9UIJ7 227 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 KCNK7Q9Y2U2 307 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 RBMX2Q9Y388 322 aaKnown RBP5.4□□□□□ -1.54
SPG11-221ENST00000560299 HIVEP1P15822 2718 aa5.4□□□□□ -1.55
SPG11-221ENST00000560299 MTORP42345 2549 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 TRBV6-6A0A0A6YYG2 114 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 TRAV24A0A0B4J272 114 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 KIR2DS1A0A191URI9 304 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 FAM240BA0A1B0GVZ2 78 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 A0A1W2PPR1 153 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 DISC1C4P0D8 188 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 OVOL3O00110 214 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 SLC33A1O00400 549 aaPredicted RBP5.39□□□□□ -1.55
SPG11-221ENST00000560299 HSPB6O14558 160 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 MGST3O14880 152 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 RAB3DO95716 219 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 PTTG1O95997 202 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 F12P00748 615 aaPredicted RBP5.39□□□□□ -1.55
SPG11-221ENST00000560299 HPXP02790 462 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 DAOP14920 347 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 AMY2BP19961 511 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 CD80P33681 288 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 KIR2DS4P43632 304 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 EFNA4P52798 201 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 ARPC4P59998 168 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 IL13RA1P78552 427 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 COL10A1Q03692 680 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 KIR2DS1Q14954 304 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 SRSF7Q16629 238 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPG11-221ENST00000560299 TRIM16LQ309B1 348 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 CHRFAM7AQ494W8 412 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 SPRNQ5BIV9 151 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 RNASE10Q5GAN6 216 aaKnown RBP5.39□□□□□ -1.55
SPG11-221ENST00000560299 ATPAF1Q5TC12 328 aaPredicted RBP5.39□□□□□ -1.55
SPG11-221ENST00000560299 SFRP4Q6FHJ7 346 aaPredicted RBP5.39□□□□□ -1.55
SPG11-221ENST00000560299 SLC35E4Q6ICL7 350 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 STEAP1BQ6NZ63 245 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 TRAT1Q6PIZ9 186 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 TMEM17Q86X19 198 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 HOGA1Q86XE5 327 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 BPIFB2Q8N4F0 458 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 DEFB108BQ8NET1 73 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 BEST4Q8NFU0 473 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 OR5T2Q8NGG2 359 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 OR4K15Q8NH41 348 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 ANGPTL6Q8NI99 470 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 ENKURQ8TC29 256 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 GCDHQ92947 438 aaPredicted RBP5.39□□□□□ -1.55
SPG11-221ENST00000560299 TRIM63Q969Q1 353 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 SDSLQ96GA7 329 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 FAM234AQ9H0X4 552 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 PPA2Q9H2U2 334 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 CHODLQ9H9P2 273 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 ZNF286AQ9HBT8 521 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 BARX1Q9HBU1 254 aaPredicted RBP5.39□□□□□ -1.55
SPG11-221ENST00000560299 TMEM165Q9HC07 324 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 MCUBQ9NWR8 336 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 KCNIP1Q9NZI2 227 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 IL36RNQ9UBH0 155 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 SCP2D1Q9UJQ7 156 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 TRAPPC2LQ9UL33 140 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 CACNG2Q9Y698 323 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 CELSR1Q9NYQ6 3014 aa5.39□□□□□ -1.55
SPG11-221ENST00000560299 IGKV1D-17A0A075B6S4 117 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 IGHV3OR15-7A0A075B7D8 119 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 TMEM30CPA0ZSE6 113 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 MEIS3P1A6NDR6 274 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.38□□□□□ -1.55
SPG11-221ENST00000560299 K7N7A8 449 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 TMPRSS2O15393 492 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 PPIHO43447 177 aaKnown RBP5.38□□□□□ -1.55
SPG11-221ENST00000560299 LANCL1O43813 399 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 SSX5O60225 188 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 GYPAP02724 150 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 CSN2P05814 226 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 FCGR3AP08637 254 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 CTXN2P0C2S0 81 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 FOSL1P15407 271 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 EGR1P18146 543 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 NAT1P18440 290 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 GZMHP20718 246 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms