RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 RIPPLY3P57055 190 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 D2HGDHQ8N465 521 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 ARHGAP5-AS1Q96IT6 56 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 SLC5A6Q9Y289 635 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 LRP12Q9Y561 859 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 IGSF23A1L1A6 192 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 H0Y8X5 98 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 K7ERU9 68 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 HPNP05981 417 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 HSD11B1P28845 292 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 MTCP1P56278 107 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 EXOSC7Q15024 291 aaKnown RBP16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 ZNF787Q6DD87 383 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 KCTD18Q6PI47 426 aaPredicted RBP16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 GPR146Q96CH1 333 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 P2RX4Q99571 388 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 SCN3AQ9NY46 2000 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 VSTM2BA6NLU5 285 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 HYPMO75409 117 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 VAMP5O95183 116 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 CTSDP07339 412 aaPredicted RBP16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 CAPZBP47756 277 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 ID2Q02363 134 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 DPTQ07507 201 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 CYP2G1PQ6ZSU1 146 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 CPEB2Q7Z5Q1 589 aaKnown RBP16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 CDRT4Q8N9R6 151 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 OR5C1Q8NGR4 320 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 TSPAN32Q96QS1 320 aa16.65■□□□□ 0.26
SEMA4B-215ENST00000560089 TRAV1-1A0A0B4J248 108 aa16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 NPIPA2E9PIF3 369 aa16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 EPHA8P29322 1005 aaPredicted RBP16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 PRR27Q6MZM9 219 aa16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 CENPVQ7Z7K6 275 aaPredicted RBP16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 SAXO1Q8IYX7 474 aa16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 LRRC75AQ8NAA5 344 aa16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 GUCD1Q96NT3 240 aa16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 BANF2Q9H503 90 aa16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 C19orf53Q9UNZ5 99 aaPredicted RBP16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 A0A1W2PNV4 684 aa16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 TMEM50BP56557 158 aa16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 RPL23P62829 140 aaKnown RBP16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 SLC2A9Q9NRM0 540 aa16.64■□□□□ 0.25
SEMA4B-215ENST00000560089 TMEM265A0A087WTH1 108 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 LRRC3CA6NJW4 275 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 RNF212BA8MTL3 300 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 P2RY10O00398 339 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 COMPP49747 757 aaPredicted RBP16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 BLKP51451 505 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 LCN15Q6UWW0 184 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 HIPK2Q9H2X6 1198 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 CLN8Q9UBY8 286 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 DMDP11532 3685 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 ZNF878C9JN71 531 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 CYR61O00622 381 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 CTXN2P0C2S0 81 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 IGLC2P0DOY2 106 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 IGLC3P0DOY3 106 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 PSG1P11464 419 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 CTRLP40313 264 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 KCNIP4Q6PIL6 250 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 TMEM108Q6UXF1 575 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 DEFB123Q8N688 67 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 OR5AU1Q8NGC0 362 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 COL4A2P08572 1712 aa16.63■□□□□ 0.25
SEMA4B-215ENST00000560089 GRIFINA4D1Z8 144 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 APOBEC3AP31941 199 aaPredicted RBP16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 SRP14P37108 136 aaKnown RBP16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 PIGPP57054 158 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 ROM1Q03395 351 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 ZNF765Q7L2R6 523 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 AMZ2Q86W34 360 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 BTF3L4Q96K17 158 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 CCDC163A0A0D9SF12 145 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 GABRG2P18507 467 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 ECI1P42126 302 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 RAB28P51157 221 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 RPL15P61313 204 aaKnown RBP16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 PRDX1Q06830 199 aaKnown RBP16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 SHBQ15464 509 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 GLIPR1L1Q6UWM5 242 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 ZNF596Q8TC21 504 aa16.62■□□□□ 0.25
SEMA4B-215ENST00000560089 ZNF814B7Z6K7 855 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 ONECUT2O95948 504 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 GLI4P10075 376 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 DYNLT3P51808 116 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 RPS20P60866 119 aaKnown RBP16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 RPS21P63220 83 aaKnown RBP16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 MRPS34P82930 218 aaKnown RBP16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 NHLH1Q02575 133 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 TMEM187Q14656 261 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 PRAMEF20Q5VT98 475 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 TMEM217Q8N7C4 229 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 RLN3Q8WXF3 142 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 TMEM56Q96MV1 263 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 SPACA5Q96QH8 159 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 FOXQ1Q9C009 403 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 ZNF160Q9HCG1 818 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 R4GMQ9 66 aa16.61■□□□□ 0.25
SEMA4B-215ENST00000560089 TMEM56-RWDD3S4R434 201 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms