RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 IFT46Q9NQC8 304 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.69□□□□□ -1.02
TPM1-221ENST00000559831 CTSZQ9UBR2 303 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 SLC25A10Q9UBX3 287 aaPredicted RBP8.69□□□□□ -1.02
TPM1-221ENST00000559831 YLPM1P49750 1951 aaKnown RBP8.69□□□□□ -1.02
TPM1-221ENST00000559831 IGHV4-30-2A0A087WSY4 118 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 TMEM30CPA0ZSE6 113 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 GABARAPH6UMI1 98 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 K7N7A8 449 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 DVL1O14640 695 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 TNFRSF13BO14836 293 aaPredicted RBP8.68□□□□□ -1.02
TPM1-221ENST00000559831 MGST3O14880 152 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 SSX5O60225 188 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 FSTL3O95633 263 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 LPLP06858 475 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 MELTFP08582 738 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 GIFP27352 417 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 CD40LGP29965 261 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 KCNJ3P48549 501 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 INPP1P49441 399 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 EDDM3BP56851 147 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 DSCR9P59020 149 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 MRPS10P82664 201 aaKnown RBP8.68□□□□□ -1.02
TPM1-221ENST00000559831 CLEC12BQ2HXU8 276 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 LRRC10Q5BKY1 277 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 KRBOX4Q5JUW0 171 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 TRIQKQ629K1 86 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 GDPD3Q7L5L3 318 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 NLRC3Q7RTR2 1065 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 LRRC75A-AS1Q8N1F1 130 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 TPRX1Q8N7U7 411 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 OR8B3Q8NGG8 313 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 OR5D13Q8NGL4 314 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 OR4K15Q8NH41 348 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 GPX8Q8TED1 209 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 CCDC107Q8WV48 283 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 SMIM4Q8WVI0 70 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 MAFIPQ8WZ33 124 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 H1FXQ92522 213 aaKnown RBP8.68□□□□□ -1.02
TPM1-221ENST00000559831 NINJ1Q92982 152 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 MBD6Q96DN6 1003 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 NEIL1Q96FI4 390 aaPredicted RBP8.68□□□□□ -1.02
TPM1-221ENST00000559831 OR8B2Q96RD0 313 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 SDHCQ99643 169 aaPredicted RBP8.68□□□□□ -1.02
TPM1-221ENST00000559831 SHARPINQ9H0F6 387 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 FAM234AQ9H0X4 552 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 SCPEP1Q9HB40 452 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 C12orf4Q9NQ89 552 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 ABCB10Q9NRK6 738 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 MIOXQ9UGB7 285 aa8.68□□□□□ -1.02
TPM1-221ENST00000559831 ZNF230Q9UIE0 474 aaPredicted RBP8.68□□□□□ -1.02
TPM1-221ENST00000559831 ABCA12Q86UK0 2595 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 CRYBG3Q68DQ2 2970 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 MEIKINA0A087WXM9 373 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 TRAV39A0A0B4J263 110 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 MEX3AA1L020 520 aaKnown RBP8.67□□□□□ -1.02
TPM1-221ENST00000559831 NDUFS8O00217 210 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 SULT1C2O00338 296 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 GSTZ1O43708 216 aaPredicted RBP8.67□□□□□ -1.02
TPM1-221ENST00000559831 LANCL1O43813 399 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 CA11O75493 328 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 RBBP9O75884 186 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 FCGR3AP08637 254 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 GDNFP39905 211 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 CBX5P45973 191 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 GLIPR1P48060 266 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 BAK1Q16611 211 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 Q5PR19 223 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 RSBN1Q5VWQ0 802 aaPredicted RBP8.67□□□□□ -1.02
TPM1-221ENST00000559831 SHEQ5VZ18 495 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 C16orf87Q6PH81 154 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 ZNF497Q6ZNH5 498 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 GVQW1Q8N7I0 195 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 MRPL30Q8TCC3 161 aaKnown RBP8.67□□□□□ -1.02
TPM1-221ENST00000559831 COQ2Q96H96 371 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 THAP7Q9BT49 309 aaPredicted RBP8.67□□□□□ -1.02
TPM1-221ENST00000559831 CCDC32Q9BV29 185 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 ST6GALNAC5Q9BVH7 336 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 PATZ1Q9HBE1 687 aaKnown RBP8.67□□□□□ -1.02
TPM1-221ENST00000559831 KAAG1Q9UBP8 84 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 KIF25Q9UIL4 384 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 TRAPPC2LQ9UL33 140 aa8.67□□□□□ -1.02
TPM1-221ENST00000559831 POLQO75417 2590 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 LINC00854A0A1B0GVQ3 168 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 FUOMA2VDF0 154 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 H7C1Q1 480 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 FCN3O75636 299 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 NAPSAO96009 420 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 MT-ND4P03905 459 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 CSN2P05814 226 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 WNT2P09544 360 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 IL7P13232 177 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 DTYMKP23919 212 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 GLP1RP43220 463 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 P2RX3P56373 397 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 SEC61A1P61619 476 aaKnown RBP8.66□□□□□ -1.02
TPM1-221ENST00000559831 ZNF57Q68EA5 555 aaPredicted RBP8.66□□□□□ -1.02
TPM1-221ENST00000559831 SLC35E4Q6ICL7 350 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 CLDND2Q8NHS1 167 aa8.66□□□□□ -1.02
TPM1-221ENST00000559831 BORCS5Q969J3 196 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms