RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 CTSDP07339 412 aaPredicted RBP10.69□□□□□ -0.7
USP3-213ENST00000559711 CTXN2P0C2S0 81 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 FCGR2CP31995 323 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 ZNF81P51508 661 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 UCP3P55916 312 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 H2BFSP57053 126 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 GMFBP60983 142 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 BAMBIQ13145 260 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 ADIPOQQ15848 244 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 NCMAPQ5T1S8 102 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 ZNF497Q6ZNH5 498 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 FAM90A1Q86YD7 464 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 UXS1Q8NBZ7 420 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 ZFAND1Q8TCF1 268 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 OR2V2Q96R30 315 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 IL19Q9UHD0 177 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 ZDHHC8Q9ULC8 765 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 hCG_1807616A0A1W2PRN6 198 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 SRRM5B3KS81 715 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 G3V3Q6 166 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 SPRY3O43610 288 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 SCTP09683 121 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 PGAM2P15259 253 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 RPS2P15880 293 aaKnown RBP10.69□□□□□ -0.7
USP3-213ENST00000559711 PI3P19957 117 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 CD34P28906 385 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 GLP1RP43220 463 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 SUPT4H1P63272 117 aaKnown RBP10.69□□□□□ -0.7
USP3-213ENST00000559711 SMIM21Q3B7S5 101 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 IGSF11Q5DX21 431 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 ZBTB8BQ8NAP8 495 aaPredicted RBP10.69□□□□□ -0.7
USP3-213ENST00000559711 OR11H4Q8NGC9 324 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 OR2T35Q8NGX2 323 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 PLPPR1Q8TBJ4 325 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 LRRC29Q8WV35 223 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 MOB3AQ96BX8 217 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 PHB2Q99623 299 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 TMPRSS13Q9BYE2 586 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 ESRP2Q9H6T0 727 aaKnown RBP10.69□□□□□ -0.7
USP3-213ENST00000559711 SLC23A1Q9UHI7 598 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 C14orf166Q9Y224 244 aaKnown RBP10.69□□□□□ -0.7
USP3-213ENST00000559711 PCNX1Q96RV3 2341 aa10.69□□□□□ -0.7
USP3-213ENST00000559711 HEATR1Q9H583 2144 aaKnown RBP10.68□□□□□ -0.7
USP3-213ENST00000559711 A0A0B4J2A0 478 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 FAM172BPA6NC97 362 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 FAM90A27PA6NNH2 459 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 GOSR2O14653 212 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 SFT2D2O95562 160 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 LHBP01229 141 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 IGHV1-46P01743 117 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 ADH4P08319 380 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 OR4A8P0C604 315 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 VAMP1P23763 118 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 SORDQ00796 357 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 SRSF4Q08170 494 aaKnown RBP10.68□□□□□ -0.7
USP3-213ENST00000559711 HERPUD1Q15011 391 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 SPRNQ5BIV9 151 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 LY6G6FQ5SQ64 297 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 LPCAT3Q6P1A2 487 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 CLEC18BQ6UXF7 455 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 MOB1BQ7L9L4 216 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 ITLN1Q8WWA0 313 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 CHIAQ9BZP6 476 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 FXYD6Q9H0Q3 95 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 OR14J1Q9UGF5 321 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 NDRG3Q9UGV2 375 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 SHPKQ9UHJ6 478 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 OPN4Q9UHM6 478 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 ERRFI1Q9UJM3 462 aaPredicted RBP10.68□□□□□ -0.7
USP3-213ENST00000559711 MGAT4AQ9UM21 535 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 WIPI2Q9Y4P8 454 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 NBEAQ8NFP9 2946 aa10.68□□□□□ -0.7
USP3-213ENST00000559711 TPRP12270 2363 aaKnown RBP10.67□□□□□ -0.7
USP3-213ENST00000559711 IGKV1-6A0A0C4DH72 117 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 NKX2-6A6NCS4 301 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 RFPL4AA6NLU0 287 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 DBX1A6NMT0 343 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 VSTM5A8MXK1 200 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 SHISA9B4DS77 424 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 RFPL4AL1F8VTS6 287 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.67□□□□□ -0.7
USP3-213ENST00000559711 PSPNO60542 156 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 TUSC2O75896 110 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 ZNF205O95201 554 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 SIX6O95475 246 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 TK1P04183 234 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 ZNF728P0DKX0 622 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 RCC1P18754 421 aaPredicted RBP10.67□□□□□ -0.7
USP3-213ENST00000559711 DNASE1P24855 282 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 KCNJ3P48549 501 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 HOXA4Q00056 320 aaPredicted RBP10.67□□□□□ -0.7
USP3-213ENST00000559711 Q5BKY6 102 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 DCAF12L2Q5VW00 463 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 LAMTOR1Q6IAA8 161 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 GCSAMQ8N6F7 178 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 OR4A4PQ8NGN8 299 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 OR5M8Q8NGP6 311 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 ERGIC1Q969X5 290 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 DIRC2Q96SL1 478 aa10.67□□□□□ -0.7
USP3-213ENST00000559711 CLEC4MQ9H2X3 399 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms