RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 EFNB2P52799 333 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 SCAND1P57086 179 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 MEF2CQ06413 473 aaPredicted RBP17.85■□□□□ 0.45
SNX1-206ENST00000559389 AESQ08117 197 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 IDNKQ5T6J7 187 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 RSBN1Q5VWQ0 802 aaPredicted RBP17.85■□□□□ 0.45
SNX1-206ENST00000559389 TMEM200BQ69YZ2 307 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 C1orf229Q6ZS94 237 aaPredicted RBP17.85■□□□□ 0.45
SNX1-206ENST00000559389 LURAP1LQ8IV03 231 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 BPIFB2Q8N4F0 458 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 FAM89BQ8N5H3 189 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 NDNFQ8TB73 568 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 PTX4Q96A99 478 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 SIRPDQ9H106 197 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 ONECUT1Q9UBC0 465 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 KPTNQ9Y664 436 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 FOXI3A8MTJ6 420 aaPredicted RBP17.84■□□□□ 0.45
SNX1-206ENST00000559389 GLAP06280 429 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 FUT3P21217 361 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 GLIPR1P48060 266 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 KRBOX4Q5JUW0 171 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 USP43Q70EL4 1123 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 UPRTQ96BW1 309 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 CYYR1Q96J86 154 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 WDFY2Q96P53 400 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 DCSTAMPQ9H295 470 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 PEX16Q9Y5Y5 336 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 ETV7Q9Y603 341 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 LINC00312Q9Y6C7 94 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 DSCAML1Q8TD84 2053 aa17.84■□□□□ 0.45
SNX1-206ENST00000559389 hADV38S2A0JD32 116 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 ODAMA1E959 279 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 MCRIP1C9JLW8 97 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 M0R1W7 72 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 PAHP00439 452 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 HNF1AP20823 631 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 ARF6P62330 175 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 RBM39Q14498 530 aaKnown RBP17.83■□□□□ 0.44
SNX1-206ENST00000559389 NKAPLQ5M9Q1 402 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 METTL11BQ5VVY1 283 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 BRICD5Q6PL45 260 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 CMTM4Q8IZR5 234 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 NEK7Q8TDX7 302 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 NEDD4LQ96PU5 975 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 BARHL1Q9BZE3 327 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 NCOR1P1Q9H4R4 102 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 ING3Q9NXR8 418 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 KIF25Q9UIL4 384 aa17.83■□□□□ 0.44
SNX1-206ENST00000559389 A0A1W2PPH5 198 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 SOCS1O15524 211 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 NOL3O60936 208 aaKnown RBP17.82■□□□□ 0.44
SNX1-206ENST00000559389 FSHBP01225 129 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 CCL3L1P16619 93 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 BLVRBP30043 206 aaPredicted RBP17.82■□□□□ 0.44
SNX1-206ENST00000559389 DLX6P56179 175 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 FAM189A2Q15884 450 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 SLC35E4Q6ICL7 350 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 IL17RELQ6ZVW7 336 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 Q8N7P7 452 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 OR56B1Q8NGI3 324 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 ISOC1Q96CN7 298 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 TBX15Q96SF7 602 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 RBM38Q9H0Z9 239 aaKnown RBP17.82■□□□□ 0.44
SNX1-206ENST00000559389 ABRACLQ9P1F3 81 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 CDC42EP3Q9UKI2 254 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 CEPT1Q9Y6K0 416 aa17.82■□□□□ 0.44
SNX1-206ENST00000559389 TMEM30CPA0ZSE6 113 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 MEX3AA1L020 520 aaKnown RBP17.81■□□□□ 0.44
SNX1-206ENST00000559389 TOX4O94842 621 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 VEGFCP49767 419 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 SPCS2Q15005 226 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 ZNF497Q6ZNH5 498 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 C6orf201Q7Z4U5 140 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 RTN4RL2Q86UN3 420 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 TEX29Q8N6K0 151 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 OR5H6Q8NGV6 325 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 KCTD12Q96CX2 325 aaKnown RBP17.81■□□□□ 0.44
SNX1-206ENST00000559389 SLC25A38Q96DW6 304 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 ZNF714Q96N38 554 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 UBE2J1Q9Y385 318 aaPredicted RBP17.81■□□□□ 0.44
SNX1-206ENST00000559389 TLN2Q9Y4G6 2542 aa17.81■□□□□ 0.44
SNX1-206ENST00000559389 MEIKINA0A087WXM9 373 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 TRGV10A0A0A0MS01 117 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 H3BMQ9 156 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 ZNF728P0DKX0 622 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 BLMHQ13867 455 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 C1orf122Q6ZSJ8 110 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 GAPTQ8N292 157 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 C11orf42Q8N5U0 333 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 CORO2AQ92828 525 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 SULT4A1Q9BR01 284 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 PCGF1Q9BSM1 259 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 RHBDL2Q9NX52 303 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 ETAA1Q9NY74 926 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 OR6C3Q9NZP0 311 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 HSF4Q9ULV5 492 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 SPATA2Q9UM82 520 aa17.8■□□□□ 0.44
SNX1-206ENST00000559389 HIVEP2P31629 2446 aa17.79■□□□□ 0.44
SNX1-206ENST00000559389 TRAV40A0A0B4J280 105 aa17.79■□□□□ 0.44
SNX1-206ENST00000559389 UBE2QL1A1L167 161 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms