RNA–Protein interactions for RNA: ENST00000558528.1

LDLR-209, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 456 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-209ENST00000558528 H0Y8G0 127 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 GMDSO60547 372 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 PRAF2O60831 178 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 WISP2O76076 250 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 GSTT2BP0CG30 244 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 SLC2A1P11166 492 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 IRF2P14316 349 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 GLRXP35754 106 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 ALDH3B1P43353 468 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 INPP1P49441 399 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 EVX1P49640 407 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 RBP2P50120 134 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 IDH3GP51553 393 aaPredicted RBP4.34□□□□□ -1.71
LDLR-209ENST00000558528 FOXG1P55316 489 aaPredicted RBP4.34□□□□□ -1.71
LDLR-209ENST00000558528 PPP1CBP62140 327 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 FAM3AP98173 230 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 ZNF181Q2M3W8 571 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 CEP78Q5JTW2 689 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 UBE2NLQ5JXB2 153 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 GLYATL3Q5SZD4 288 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 OTPQ5XKR4 325 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 TMEM42Q69YG0 159 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 BTNL8Q6UX41 500 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 PLXDC2Q6UX71 529 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 FAM131AQ6UXB0 335 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 FBXW12Q6X9E4 464 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 OR2W3Q7Z3T1 314 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 LRRTM1Q86UE6 522 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 NAA40Q86UY6 237 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 LAX1Q8IWV1 398 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 JAGN1Q8N5M9 183 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 ZSCAN4Q8NAM6 433 aaPredicted RBP4.34□□□□□ -1.71
LDLR-209ENST00000558528 MINDY2Q8NBR6 621 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 OR5A2Q8NGI9 324 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 OR51A4Q8NGJ6 313 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 OR52B4Q8NGK2 314 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 OR1J1Q8NGS3 322 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 OR13C5Q8NGS8 318 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 IL17DQ8TAD2 202 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 KCNG3Q8TAE7 436 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 FGFBP3Q8TAT2 258 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 TRMT10AQ8TBZ6 339 aaKnown RBP4.34□□□□□ -1.71
LDLR-209ENST00000558528 CA5BP1Q8WTZ4 195 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 DEDD2Q8WXF8 326 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 RGP1Q92546 391 aaPredicted RBP4.34□□□□□ -1.71
LDLR-209ENST00000558528 RNASE6Q93091 150 aaKnown RBP4.34□□□□□ -1.71
LDLR-209ENST00000558528 FAM3DQ96BQ1 224 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 HAVCR1Q96D42 359 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 ZNF75AQ96N20 296 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 MICU1Q9BPX6 476 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 ACTR6Q9GZN1 396 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 FAM234AQ9H0X4 552 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 METTL9Q9H1A3 318 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 ABCG5Q9H222 651 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 TAS2R4Q9NYW5 299 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 TINAGQ9UJW2 476 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 CPAMD8Q8IZJ3 1885 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 ESPL1Q14674 2120 aa4.34□□□□□ -1.71
LDLR-209ENST00000558528 ACANP16112 2415 aa4.34□□□□□ -1.72
LDLR-209ENST00000558528 NSD1Q96L73 2696 aaPredicted RBP4.33□□□□□ -1.72
LDLR-209ENST00000558528 NINQ8N4C6 2090 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 EXPH5Q8NEV8 1989 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 TRAV8-7A0A075B6U6 113 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 A0A0G2JK05 382 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 XKRY2A2RUG3 117 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 OR5B21A6NL26 309 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 TMEM210A6NLX4 147 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 CD300LBA8K4G0 201 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 CENPXA8MT69 81 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 F8VVB4 439 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 F8VWA3 439 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 SULT1C2O00338 296 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 GPR137BO60478 399 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 KDM4BO94953 1096 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 ECDO95905 644 aaPredicted RBP4.33□□□□□ -1.72
LDLR-209ENST00000558528 SFTPBP07988 381 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 ZNF35P13682 527 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 TGFBR1P36897 503 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 CDKN1AP38936 164 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 MNDAP41218 407 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 GLIPR1P48060 266 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 COMPP49747 757 aaPredicted RBP4.33□□□□□ -1.72
LDLR-209ENST00000558528 P2RX3P56373 397 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 AP3S2P59780 193 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 SEC61BP60468 96 aaKnown RBP4.33□□□□□ -1.72
LDLR-209ENST00000558528 NAAAQ02083 359 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 ZNF92Q03936 586 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 IL18Q14116 193 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 GK2Q14410 553 aaPredicted RBP4.33□□□□□ -1.72
LDLR-209ENST00000558528 INSL4Q14641 139 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 ICAM4Q14773 271 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 KISS1Q15726 138 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 CARTPTQ16568 116 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 SNAI3Q3KNW1 292 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 CEACAM21Q3KPI0 293 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 PIK3CD-AS1Q5SR53 167 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 FAM27D1Q5T7N8 215 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 C3P1Q6ZMU1 363 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 ANGPTL5Q86XS5 388 aa4.33□□□□□ -1.72
LDLR-209ENST00000558528 ZNF584Q8IVC4 421 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms