RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CEACAM19Q7Z692 300 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 TRAPPC6BQ86SZ2 158 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 RTN4RL2Q86UN3 420 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 C3orf56Q8N813 242 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 BEND2Q8NDZ0 799 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 OR11H6Q8NGC7 330 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 OR4D6Q8NGJ1 314 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 CREB3L1Q96BA8 519 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 MALSU1Q96EH3 234 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 C1orf147Q96MC9 270 aaPredicted RBP6.92□□□□□ -1.3
TPM1-213ENST00000558400 DUX5Q96PT3 197 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 MGLLQ99685 303 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 TMED9Q9BVK6 235 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 ACOT13Q9NPJ3 140 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 IL36RNQ9UBH0 155 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 TBL2Q9Y4P3 447 aaKnown RBP6.92□□□□□ -1.3
TPM1-213ENST00000558400 LRRC42Q9Y546 428 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 SOX21Q9Y651 276 aaPredicted RBP6.92□□□□□ -1.3
TPM1-213ENST00000558400 ODAMA1E959 279 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A10PA6NDY2 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A18PA6NE21 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM181BA6NEQ2 426 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A16PA6NEW6 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A20PA6NIJ5 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A8PA6NJQ4 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A7PA6NKC0 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 ZNF729A6NN14 1252 aaPredicted RBP6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A22PA8MWA6 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A12PA8MX19 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A5PA8MXJ8 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A23PA8MXZ1 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 PIN1P1O15428 100 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 SC5DO75845 299 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 OR7C1O76099 320 aaPredicted RBP6.91□□□□□ -1.3
TPM1-213ENST00000558400 GLAP06280 429 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 UCHL1P09936 223 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A15PP0C7V4 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A13PP0C7W8 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A14PP0C7W9 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 FAM90A24PP0C7X0 464 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 CPEP16870 476 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 SERPINA2P20848 420 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 GLIPR1P48060 266 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 RBM11P57052 281 aaKnown RBP6.91□□□□□ -1.3
TPM1-213ENST00000558400 GABARAPL2P60520 117 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 KLRD1Q13241 179 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 RBM39Q14498 530 aaKnown RBP6.91□□□□□ -1.3
TPM1-213ENST00000558400 TBCEQ15813 527 aaPredicted RBP6.91□□□□□ -1.3
TPM1-213ENST00000558400 SLC22A6Q4U2R8 563 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 HSD17B12Q53GQ0 312 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 MINOS1Q5TGZ0 78 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 LIPKQ5VXJ0 399 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 AWAT2Q6E213 333 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 HCP5Q6MZN7 132 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 GLIPR1L1Q6UWM5 242 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 HEPN1Q6WQI6 88 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 PNKDQ8N490 385 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 SVOPQ8N4V2 548 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 OR10K1Q8NGX5 313 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 ORAI1Q96D31 301 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 CST11Q9H112 138 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 PPA2Q9H2U2 334 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 RAB9BQ9NP90 201 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 ZNRD1Q9P1U0 126 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 MRPS28Q9Y2Q9 187 aaKnown RBP6.91□□□□□ -1.3
TPM1-213ENST00000558400 SESN1Q9Y6P5 492 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 MINOS1-NBL1R4GNA1 71 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 TGP01266 2768 aa6.91□□□□□ -1.3
TPM1-213ENST00000558400 MEIKINA0A087WXM9 373 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 TRAV24A0A0B4J272 114 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 KBTBD11-OT1A0A1B0GTJ5 212 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 MDFIC2A0A1B0GVS7 189 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 A0A1W2PRD5 423 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 A0A1W2PRF3 423 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 A0A1W2PRM7 423 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 MCRIP1C9JLW8 97 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 CA11O75493 328 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 CLPXO76031 633 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 BPNT1O95861 308 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 ARG1P05089 322 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 CD37P11049 281 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 GABRA5P31644 462 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 PRRX1P54821 245 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 PIGYQ3MUY2 71 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 C1orf100Q5SVJ3 147 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 ZNF626Q68DY1 528 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 SLC35E4Q6ICL7 350 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 ZNF782Q6ZMW2 699 aaPredicted RBP6.9□□□□□ -1.3
TPM1-213ENST00000558400 SLC16A12Q6ZSM3 486 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 ZNF367Q7RTV3 350 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 LYPD6Q86Y78 171 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 TPRX1Q8N7U7 411 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 SUMF2Q8NBJ7 301 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 OR10A7Q8NGE5 316 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 OR4F5Q8NH21 305 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 KCNG3Q8TAE7 436 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 ZNF596Q8TC21 504 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 SGCDQ92629 289 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 FCGR1BQ92637 280 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 TMEM203Q969S6 136 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms