RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 K7EPK0 472 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 WIPF1O43516 503 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H2BKO60814 126 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ALOX12BO75342 701 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 DHRS3O75911 302 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 MPIG6BO95866 241 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 MT-CO2P00403 227 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 CSTBP04080 98 aaKnown RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 CSN2P05814 226 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H2BJP06899 126 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FBXO45P0C2W1 286 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A15PP0C7V4 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 SEC11BP0C7V7 166 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A13PP0C7W8 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A14PP0C7W9 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM90A24PP0C7X0 464 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 PGA4P0DJD7 388 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 PGA3P0DJD8 388 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 SMIM17P0DL12 118 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 PGAM2P15259 253 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF17P17021 662 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H2BOP23527 126 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 GCH1P30793 250 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H2BBP33778 126 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 TIMP3P35625 211 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 SULT1A1P50225 295 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 SULT1A2P50226 295 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ATP1B3P54709 279 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H2BDP58876 126 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 PPP1CAP62136 330 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H2BCP62807 126 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H3AP68431 136 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 IL13RA2Q14627 380 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 CLINT1Q14677 625 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 MELKQ14680 651 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 CSRP2Q16527 193 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 SRSF7Q16629 238 aaKnown RBP eCLIP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST3H3Q16695 136 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST2H2BEQ16778 126 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 SLC22A6Q4U2R8 563 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ABCA11PQ4W5N1 156 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 TM4SF20Q53R12 229 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FBLN7Q53RD9 439 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF542PQ5EBM4 170 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 Q5PR19 223 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 C10orf128Q5T292 105 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 PLCXD3Q63HM9 321 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF585AQ6P3V2 769 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 SLC25A47Q6Q0C1 308 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 PLXDC2Q6UX71 529 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 TMEM108Q6UXF1 575 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 Q6ZSR3 168 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ANKRD37Q7Z713 158 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 LHFPL1Q86WI0 220 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 NIT1Q86X76 327 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF761Q86XN6 746 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 C20orf196Q8IYI0 205 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 PRR22Q8IZ63 422 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 BATF2Q8N1L9 274 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 PNKDQ8N490 385 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 FAM24BQ8N5W8 94 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 RELL2Q8NC24 303 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 SMRP1Q8NCR6 262 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 CSNK2A3Q8NEV1 391 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 STXBP6Q8NFX7 210 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 OR8G5Q8NG78 346 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 OR51T1Q8NGJ9 327 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 OR13C9Q8NGT0 318 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 OR1L3Q8NH93 324 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ADAMTS17Q8TE56 1095 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 THAP3Q8WTV1 239 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 CASTOR1Q8WTX7 329 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ZCCHC14Q8WYQ9 949 aaKnown RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 NAT6Q93015 286 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H2BHQ93079 126 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 TSLPQ969D9 159 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 TMEM186Q96B77 213 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF501Q96CX3 271 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ABHD17AQ96GS6 310 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 YPEL4Q96NS1 127 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H2BNQ99877 126 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 HIST1H2BMQ99879 126 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 MICU1Q9BPX6 476 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 RPP25Q9BUL9 199 aaKnown RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 DEFB126Q9BYW3 111 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 LPAR5Q9H1C0 372 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 NELFAQ9H3P2 528 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF552Q9H707 407 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 TAF9BQ9HBM6 251 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 NECAP2Q9NVZ3 263 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 BET1LQ9NYM9 111 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 NAT8Q9UHE5 227 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF230Q9UIE0 474 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-207ENST00000558335 RARRES3Q9UL19 164 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 COX11Q9Y6N1 276 aa4.81□□□□□ -1.64
GABPB1-207ENST00000558335 EXPH5Q8NEV8 1989 aa4.8□□□□□ -1.64
GABPB1-207ENST00000558335 IGHV2OR16-5A0A0B4J2B6 119 aa4.8□□□□□ -1.64
GABPB1-207ENST00000558335 A0A1B0GTH9 108 aa4.8□□□□□ -1.64
GABPB1-207ENST00000558335 MEIS3P1A6NDR6 274 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms