RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 CCNOP22674 350 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 OPRM1P35372 400 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 EIF2S3P41091 472 aaKnown RBP7.13□□□□□ -1.27
SPG11-209ENST00000558253 SULT1A2P50226 295 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 UBE2NP61088 152 aaKnown RBP7.13□□□□□ -1.27
SPG11-209ENST00000558253 MZT1Q08AG7 82 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 PJVKQ0ZLH3 352 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 BEX5Q5H9J7 111 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 FAM76BQ5HYJ3 339 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 C10orf91Q5T1B1 145 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 OR2A2Q6IF42 318 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 FIP1L1Q6UN15 594 aaKnown RBP7.13□□□□□ -1.27
SPG11-209ENST00000558253 IGFL2Q6UWQ7 119 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 C8orf86Q6ZUL3 223 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 P4HA3Q7Z4N8 544 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.13□□□□□ -1.27
SPG11-209ENST00000558253 PIP4P1Q86T03 277 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 CALHM1Q8IU99 346 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 CLEC18CQ8NCF0 446 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 BPIFCQ8NFQ6 507 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 TOMM40LQ969M1 308 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 MSI2Q96DH6 328 aaKnown RBP7.13□□□□□ -1.27
SPG11-209ENST00000558253 RRNAD1Q96FB5 475 aaKnown RBP7.13□□□□□ -1.27
SPG11-209ENST00000558253 KIRREL1Q96J84 757 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 HDHD3Q9BSH5 251 aaPredicted RBP7.13□□□□□ -1.27
SPG11-209ENST00000558253 SLC25A31Q9H0C2 315 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 TMEM222Q9H0R3 208 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 OBP2BQ9NPH6 170 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 MLXQ9UH92 298 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 IL17BQ9UHF5 180 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 STRAPQ9Y3F4 350 aaKnown RBP7.13□□□□□ -1.27
SPG11-209ENST00000558253 PHF3Q92576 2039 aaKnown RBP7.13□□□□□ -1.27
SPG11-209ENST00000558253 KIAA1549Q9HCM3 1950 aa7.13□□□□□ -1.27
SPG11-209ENST00000558253 TRAV17A0A0B4J275 112 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 PCP4L1A6NKN8 68 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 ZNF705EA8MWA4 302 aaPredicted RBP7.12□□□□□ -1.27
SPG11-209ENST00000558253 CDRT15L2A8MXV6 281 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 AQP7O14520 342 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 MSTNO14793 375 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 DEGS1O15121 323 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 F10P00742 488 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 IGHV3-9P01782 118 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 S100A9P06702 114 aaKnown RBP7.12□□□□□ -1.27
SPG11-209ENST00000558253 OR5AC1P0C628 307 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 SMIM6P0DI80 62 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 AADACP22760 399 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 CD200P41217 278 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 KCNJ3P48549 501 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 MEOX2P50222 304 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 TNFSF10P50591 281 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 CAV2P51636 162 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 GPM6AP51674 278 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 F2RL1P55085 397 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 SPIN3Q5JUX0 258 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 ZNF880Q6PDB4 577 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 ZNF695Q8IW36 515 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 FAM58AQ8N1B3 248 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 GLYATL2Q8WU03 294 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 TMED6Q8WW62 240 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 HPSE2Q8WWQ2 592 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 SLAMF9Q96A28 289 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 MRPL24Q96A35 216 aaKnown RBP7.12□□□□□ -1.27
SPG11-209ENST00000558253 AKR1E2Q96JD6 320 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 DMRTA2Q96SC8 542 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 C12orf57Q99622 126 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 SEC11CQ9BY50 192 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 OR51I2Q9H344 312 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 SMDT1Q9H4I9 107 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 ASF1BQ9NVP2 202 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 MTCH1Q9NZJ7 389 aa7.12□□□□□ -1.27
SPG11-209ENST00000558253 ZNF629Q9UEG4 869 aaPredicted RBP7.12□□□□□ -1.27
SPG11-209ENST00000558253 CARHSP1Q9Y2V2 147 aaKnown RBP7.12□□□□□ -1.27
SPG11-209ENST00000558253 UBE2J1Q9Y385 318 aaPredicted RBP7.12□□□□□ -1.27
SPG11-209ENST00000558253 EML6Q6ZMW3 1958 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 TRIOBPQ9H2D6 2365 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.11□□□□□ -1.27
SPG11-209ENST00000558253 AHRRA9YTQ3 701 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 H0Y980 276 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 LGALS8O00214 317 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 PHF1O43189 567 aaPredicted RBP7.11□□□□□ -1.27
SPG11-209ENST00000558253 ATG12O94817 140 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 IL18BPO95998 194 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 APOC3P02656 99 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 MBPP02686 304 aaPredicted RBP7.11□□□□□ -1.27
SPG11-209ENST00000558253 CBR1P16152 277 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 VDAC1P21796 283 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 GNRHRP30968 328 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 RFC3P40938 356 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 NPBWR2P48146 333 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 TMEM33P57088 247 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 FXYD4P59646 89 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 POLR2GP62487 172 aaKnown RBP eCLIP7.11□□□□□ -1.27
SPG11-209ENST00000558253 BAXQ07812 192 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 ZNF266Q14584 549 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 OR8G1Q15617 311 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 MSMO1Q15800 293 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 EIF2S3LQ2VIR3 472 aaKnown RBP7.11□□□□□ -1.27
SPG11-209ENST00000558253 DMRTC1Q5HYR2 192 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 FAM74A1Q5RGS3 127 aa7.11□□□□□ -1.27
SPG11-209ENST00000558253 TMEM268Q5VZI3 342 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms