RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 FAM172BPA6NC97 362 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 H0YJX3 145 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 ZFPL1O95159 310 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 DUS4LO95620 317 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 CD2P06729 351 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 RAB3AP20336 220 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 OR3A4PP47883 348 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 KCNJ3P48549 501 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 SLC35A2P78381 396 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 RAB40BQ12829 278 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 ATXN7L3Q14CW9 347 aaPredicted RBP10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 RSU1Q15404 277 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 PAN3Q58A45 887 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 ZNF691Q5VV52 312 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 SLC16A12Q6ZSM3 486 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 CCDC121Q6ZUS5 278 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 SATL1Q86VE3 508 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 THNSL2Q86YJ6 484 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 CBR4Q8N4T8 237 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 PXT1Q8NFP0 134 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 OR51T1Q8NGJ9 327 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 PHF21AQ96BD5 680 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 COQ2Q96H96 371 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 NR1H4Q96RI1 486 aaPredicted RBP10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 C9orf16Q9BUW7 83 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 ZNF281Q9Y2X9 895 aa10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 RPL36Q9Y3U8 105 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-204ENST00000558020 LY6LH3BQJ8 138 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 MADCAM1Q13477 382 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 CDK5R1Q15078 307 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 KHDC1LQ5JSQ8 128 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 C9orf152Q5JTZ5 239 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 BAIAP2L2Q6UXY1 529 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 OR10A7Q8NGE5 316 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 RHOXF1Q8NHV9 184 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 CNIH3Q8TBE1 160 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 MYDGFQ969H8 173 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 TOMM40LQ969M1 308 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 RCC1LQ96I51 464 aaKnown RBP10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 ISG20L2Q9H9L3 353 aaKnown RBP10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 ERVK13-1Q9NX77 482 aa10.86□□□□□ -0.67
SNRPA1-204ENST00000558020 J3QR06 171 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 IGLL1P15814 213 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 GZMHP20718 246 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 GLP1RP43220 463 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 RAB7AP51149 207 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 ZP1P60852 638 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 IL13RA2Q14627 380 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 C17orf58Q2M2W7 97 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 FOXB2Q5VYV0 432 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 TNFAIP8L1Q8WVP5 186 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 KIRREL1Q96J84 757 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 S100A13Q99584 98 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 PDCD1LG2Q9BQ51 273 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 GPR61Q9BZJ8 451 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 PPIL3Q9H2H8 161 aaKnown RBP10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 LINC00574Q9H8X3 128 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 AMBNQ9NP70 447 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 FAM118AQ9NWS6 357 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 PAK1IP1Q9NWT1 392 aaPredicted RBP10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 AURKAIP1Q9NWT8 199 aaPredicted RBP10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 CALYQ9NYX4 217 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 IDI2-AS1Q9NZ38 188 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 KIF25Q9UIL4 384 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 MOB4Q9Y3A3 225 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 HSPE1-MOB4S4R3N1 261 aa10.85□□□□□ -0.67
SNRPA1-204ENST00000558020 LOC100130705A0A1B0GUX0 176 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 PSMB11A5LHX3 300 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 E9PQ18 207 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 HSPB6O14558 160 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 CSTBP04080 98 aaKnown RBP10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 CGB3P0DN86 165 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 CGB7P0DN87 165 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 GDNFP39905 211 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 PAX5Q02548 391 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 HES1Q14469 280 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 CCDC58Q4VC31 144 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 TCTEX1D4Q5JR98 221 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 TMPRSS11AQ6ZMR5 421 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 RNF144BQ7Z419 303 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 OR8H3Q8N146 312 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 OSR2Q8N2R0 312 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 OR51D1Q8NGF3 324 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 OR10X1Q8NGY0 326 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 GPR148Q8TDV2 347 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 FAM192AQ9GZU8 254 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 MRPS18AQ9NVS2 196 aaKnown RBP10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 AASSQ9UDR5 926 aa10.84□□□□□ -0.67
SNRPA1-204ENST00000558020 TRAV24A0A0B4J272 114 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 E9PI62 339 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 H3BNX3 289 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 HTR3BO95264 441 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 IL1AP01583 271 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 AMY1AP04745 511 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 AMY2AP04746 511 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 GABRB1P18505 474 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 SLC6A1P30531 599 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 PPP3R1P63098 170 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 SLC35B1P78383 322 aa10.83□□□□□ -0.68
SNRPA1-204ENST00000558020 ZSCAN26Q16670 478 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms