RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 DKKL1Q9UK85 242 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 CLEC18AA5D8T8 446 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 TK1P04183 234 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 HLA-DRB3P79483 266 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 RUNX1Q01196 453 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 ZNF385CQ66K41 422 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 CLEC18CQ8NCF0 446 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 OR10G4Q8NGN3 311 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 PIGCQ92535 297 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 POM121Q96HA1 1249 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 ATP5SQ99766 215 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 HS3ST3B1Q9Y662 390 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 OR6C6A6NF89 314 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 RPL36A-HNRNPH2H7BZ11 118 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 NDUFS6O75380 124 aaKnown RBP10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 LIFP15018 202 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 ZNF32P17041 273 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 VDAC1P21796 283 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 TAS2R30P59541 319 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 ID3Q02535 119 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 IL24Q13007 206 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 NMSQ5H8A3 153 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 ODF3L1Q8IXM7 274 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 TECTBQ96PL2 329 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 P4HTMQ9NXG6 502 aa10.19□□□□□ -0.78
VIPAS39-211ENST00000557658 SDK1Q7Z5N4 2213 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 A0A0J9YW62 118 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 ZNF816-ZNF321PA0A0X1KG74 233 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 LOC102723971A0A1B0GUV8 181 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 hCG_38984A0A1B0GV85 526 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 TNFSF11O14788 317 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 TRGC2P03986 189 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 EPHA1P21709 976 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 GPX4P36969 197 aaPredicted RBP10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 FOXO1Q12778 655 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 OR8G1Q15617 311 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 DNLZQ5SXM8 178 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 Q6ZS49 121 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 P4HA3Q7Z4N8 544 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST3H2BBQ8N257 126 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 GAPTQ8N292 157 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 EXTL1Q92935 676 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 SIGLEC12Q96PQ1 595 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 SF3B5Q9BWJ5 86 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 CRLF2Q9HC73 371 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 TMEM38BQ9NVV0 291 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 VCANP13611 3396 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 TGOLN2O43493 480 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 CHST1O43916 411 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 ZIC3O60481 467 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 DFFBO76075 338 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 TMEM50AO95807 157 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST1H1BP16401 226 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 UCP1P25874 307 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 ZNF92Q03936 586 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 ZNF154Q13106 437 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 KRTAP27-1Q3LI81 207 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 OR2T2Q6IF00 324 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 CDPF1Q6NVV7 123 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 ZNF818PQ6ZRF7 136 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 C1orf87Q8N0U7 546 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 GPR61Q9BZJ8 451 aa10.18□□□□□ -0.78
VIPAS39-211ENST00000557658 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 TRAV1-1A0A0B4J248 108 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A10PA6NDY2 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A18PA6NE21 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A16PA6NEW6 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A20PA6NIJ5 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A8PA6NJQ4 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A7PA6NKC0 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A22PA8MWA6 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A12PA8MX19 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A5PA8MXJ8 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A23PA8MXZ1 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 PTBP3O95758 552 aaKnown RBP10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A15PP0C7V4 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A13PP0C7W8 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A14PP0C7W9 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM90A24PP0C7X0 464 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 PATE4P0C8F1 98 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 CCL3P10147 92 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 B4GALT1P15291 398 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 CD200P41217 278 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 CD81P60033 236 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 RAC1P63000 192 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 SRSF7Q16629 238 aaKnown RBP eCLIP10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 SLC25A26Q70HW3 274 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 STX12Q86Y82 276 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 ZNF611Q8N823 705 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 PLPPR1Q8TBJ4 325 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 CPT1CQ8TCG5 803 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 FAM210BQ96KR6 192 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 SRXN1Q9BYN0 137 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 PRDM13Q9H4Q3 707 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 CALHM2Q9HA72 323 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 CCDC163A0A0D9SF12 145 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 GJE1A6NN92 205 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 IFNA5P01569 189 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 SOD3P08294 240 aa10.17□□□□□ -0.78
VIPAS39-211ENST00000557658 CYC1P08574 325 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms