RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 IGSF11Q5DX21 431 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 MRPL14Q6P1L8 145 aaKnown RBP14.05□□□□□ -0.16
SHMT2-232ENST00000557487 ZFP62Q8NB50 900 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-232ENST00000557487 WSB1Q9Y6I7 421 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 ZIC3O60481 467 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 UCP1P25874 307 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 GNRHRP30968 328 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 RAC3P60763 192 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 PNRC1Q12796 327 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-232ENST00000557487 ICAM4Q14773 271 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 PCOLCEQ15113 449 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 NCMAPQ5T1S8 102 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 ZNF774Q6NX45 483 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 TBC1D26Q86UD7 250 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 SAXO1Q8IYX7 474 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 IL22RA1Q8N6P7 574 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 OR5C1Q8NGR4 320 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 UCN2Q96RP3 112 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 ATP5SQ99766 215 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 TMEM242Q9NWH2 141 aa14.05□□□□□ -0.16
SHMT2-232ENST00000557487 UNC13CQ8NB66 2214 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 SLC25A6P12236 298 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 CCL20P78556 96 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 DLK1P80370 383 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 NMSQ5H8A3 153 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 RIPPLY2Q5TAB7 128 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 PLCXD3Q63HM9 321 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 AKR7LQ8NHP1 331 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 DYRK2Q92630 601 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 SLAMF9Q96A28 289 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 DUSP23Q9BVJ7 150 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 ZNF581Q9P0T4 197 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 DOK5Q9P104 306 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 R4GN57 208 aa14.04□□□□□ -0.16
SHMT2-232ENST00000557487 IGHV3-15A0A0B4J1V0 119 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 KIR2DS1A0A191URI9 304 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 SSSCA1O60232 199 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 CBR3O75828 277 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 MYF5P13349 255 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 ITGA3P26006 1051 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 S100GP29377 79 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 KIR2DS4P43632 304 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 TAS2R30P59541 319 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 KIR2DS1Q14954 304 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 ZNF674Q2M3X9 581 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 ACSF3Q4G176 576 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-232ENST00000557487 OR2B11Q5JQS5 317 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 OR5D13Q8NGL4 314 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 CLDND2Q8NHS1 167 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 TMEM171Q8WVE6 324 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 KCNE4Q8WWG9 221 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 CPNE4Q96A23 557 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-232ENST00000557487 SPSB4Q96A44 273 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 RNF150Q9ULK6 438 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 A0A0J9YW62 118 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 FAM221AA4D161 298 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 ZNF205O95201 554 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 GLI4P10075 376 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 ZNF32P17041 273 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 PLA2G5P39877 138 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 DYNLT3P51808 116 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 CMTM1Q8IZ96 169 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 M1APQ8TC57 530 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 Q8WTZ3 238 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 Q9N2K0 584 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 SH2D2AQ9NP31 389 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 SLC7A10Q9NS82 523 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 LIPGQ9Y5X9 500 aa14.03□□□□□ -0.16
SHMT2-232ENST00000557487 GON4LQ3T8J9 2241 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 A0A1B0GV50 99 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 CDRT15L2A8MXV6 281 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 H0Y980 276 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 ADAM20O43506 726 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 TUSC2O75896 110 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 OR7C1O76099 320 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-232ENST00000557487 SSR4P51571 173 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 NDUFA6P56556 154 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 HLA-DRB3P79483 266 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 NRN1LQ496H8 165 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 STX12Q86Y82 276 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 H1FOOQ8IZA3 346 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-232ENST00000557487 SUMF1Q8NBK3 374 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 EXTL1Q92935 676 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 FAM122AQ96E09 287 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 SIGLEC12Q96PQ1 595 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 OR2H1Q9GZK4 316 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 RIMS4Q9H426 269 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-232ENST00000557487 GLRX2Q9NS18 164 aa14.02□□□□□ -0.16
SHMT2-232ENST00000557487 MUC6Q6W4X9 2439 aa14.02□□□□□ -0.17
SHMT2-232ENST00000557487 MYO7BQ6PIF6 2116 aa14.02□□□□□ -0.17
SHMT2-232ENST00000557487 IGHV5-10-1A0A0J9YXX1 117 aa14.02□□□□□ -0.17
SHMT2-232ENST00000557487 LOC102723971A0A1B0GUV8 181 aa14.02□□□□□ -0.17
SHMT2-232ENST00000557487 ZNF587BE7ETH6 402 aa14.02□□□□□ -0.17
SHMT2-232ENST00000557487 YIF1AO95070 293 aa14.02□□□□□ -0.17
SHMT2-232ENST00000557487 WNT2P09544 360 aa14.02□□□□□ -0.17
SHMT2-232ENST00000557487 RPL23AP62750 156 aaKnown RBP14.02□□□□□ -0.17
SHMT2-232ENST00000557487 RNPS1Q15287 305 aaKnown RBP14.02□□□□□ -0.17
SHMT2-232ENST00000557487 HAGHQ16775 308 aa14.02□□□□□ -0.17
SHMT2-232ENST00000557487 TRIM61Q5EBN2 209 aa14.02□□□□□ -0.17
SHMT2-232ENST00000557487 SPIN3Q5JUX0 258 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms