RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 AIF1LQ9BQI0 150 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 C7orf50Q9BRJ6 194 aaKnown RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 TMEM208Q9BTX3 173 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PKIBQ9C010 78 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 ZNF430Q9H8G1 570 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 NMNAT1Q9HAN9 279 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 NMRAL1Q9HBL8 299 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PDP1Q9P0J1 537 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 GSKIPQ9P0R6 139 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 METTL1Q9UBP6 276 aaKnown RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 ZNF282Q9UDV7 671 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OR12D3Q9UGF7 316 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 DKKL1Q9UK85 242 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 OR52A1Q9UKL2 312 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 FBXO5Q9UKT4 447 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 HSPB11Q9Y547 144 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 U3KQ87 197 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 TMEM131Q92545 1883 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 TENM4Q6N022 2769 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PI4KAP42356 2102 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 PTPRDP23468 1912 aa3.19□□□□□ -1.9
PRPF39-212ENST00000557477 BPTFQ12830 3046 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 A0A1B0GW55 424 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 A0A1W2PPE3 182 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 F5H5T6 163 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 GGCTO75223 188 aaKnown RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 CYB5R3P00387 301 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 P04436 131 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 DUX4L2P0CJ85 424 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 DUX4L3P0CJ86 424 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 DUX4L4P0CJ87 422 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 DUX4L5P0CJ88 424 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 DUX4L6P0CJ89 424 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 DUX4L7P0CJ90 424 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 SLC35E2BP0CK96 405 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 MYL2P10916 166 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 LIPCP11150 499 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 CTSEP14091 401 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 ATP1B2P14415 290 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 SPNP16150 400 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 ELK1P19419 428 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 BGNP21810 368 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 COX7A1P24310 79 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 HLA-DMAP28067 261 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 IL12BP29460 328 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 MAS1LP35410 378 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 KIR2DS4P43632 304 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 KCNJ3P48549 501 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 TGM4P49221 684 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 RAB5CP51148 216 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 GPM6AP51674 278 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 SLC18A1P54219 525 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 VSX2P58304 361 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 KRTAP10-3P60369 221 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 GK3PQ14409 553 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 IGFBP7Q16270 282 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 C6orf226Q5I0X4 101 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 CTSL3PQ5NE16 218 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 TMEM215Q68D42 235 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 GUSBP11Q6P575 273 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 HAGHLQ6PII5 290 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 Q6ZN92 141 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 EIF3MQ7L2H7 374 aaKnown RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 H2BFWTQ7Z2G1 175 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 PID1Q7Z2X4 250 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 ABHD12BQ7Z5M8 362 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 S100A7AQ86SG5 101 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 UNC93AQ86WB7 457 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 FAM58AQ8N1B3 248 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 FAM86B1Q8N7N1 296 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 C20orf203Q8NBC4 194 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 OR10G3Q8NGC4 313 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 OR1L6Q8NGR2 347 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 OR9G1Q8NH87 305 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 PIH1D2Q8WWB5 315 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 CYGBQ8WWM9 190 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 CACNG8Q8WXS5 425 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 CDS1Q92903 461 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 RAB1CQ92928 201 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 NAT6Q93015 286 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 TMEM101Q96IK0 257 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 ITCHQ96J02 903 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 RBBP8Q99708 897 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 HOPXQ9BPY8 73 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 THTPAQ9BU02 230 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 UGT2B28Q9BY64 529 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 REG4Q9BYZ8 158 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 ANKRD60Q9BZ19 345 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 ULBP1Q9BZM6 244 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 NKX6-2Q9C056 277 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 DCSTAMPQ9H295 470 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 PDFQ9HBH1 243 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 IMP3Q9NV31 184 aaKnown RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 DHCR7Q9UBM7 475 aaKnown RBP3.18□□□□□ -1.9
PRPF39-212ENST00000557477 DUX4Q9UBX2 424 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 ASF1AQ9Y294 204 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 RNF11Q9Y3C5 154 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 CDH10Q9Y6N8 788 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 ANAPC1Q9H1A4 1944 aa3.18□□□□□ -1.9
PRPF39-212ENST00000557477 KALRNO60229 2985 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms