RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 OR10R2Q8NGX6 335 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 ITLN1Q8WWA0 313 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 SPSB1Q96BD6 273 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 CPNE2Q96FN4 548 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-230ENST00000557427 RNF170Q96K19 258 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 GPER1Q99527 375 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 URM1Q9BTM9 101 aaKnown RBP10.41□□□□□ -0.74
SHMT2-230ENST00000557427 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 LPAR5Q9H1C0 372 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 DCAF16Q9NXF7 216 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 NUP50Q9UKX7 468 aa10.41□□□□□ -0.74
SHMT2-230ENST00000557427 G3V4G9 280 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 H0YL77 283 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 C1QBP02746 253 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 CD74P04233 296 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 CD55P08174 381 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 ADH4P08319 380 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 GSTP1P09211 210 aaKnown RBP10.4□□□□□ -0.74
SHMT2-230ENST00000557427 PRKACBP22694 351 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 PTGFRP43088 359 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 RELBQ01201 579 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 MALLQ13021 153 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 CNN3Q15417 329 aaKnown RBP10.4□□□□□ -0.74
SHMT2-230ENST00000557427 FCN2Q15485 313 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 TMEM42Q69YG0 159 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 BRICD5Q6PL45 260 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 CRIP3Q6Q6R5 217 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 FBXW12Q6X9E4 464 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 ZNF782Q6ZMW2 699 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-230ENST00000557427 COLCA1Q6ZS62 124 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 RNF144BQ7Z419 303 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 OR8G5Q8NG78 346 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 OR13G1Q8NGZ3 307 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 SPSB4Q96A44 273 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 DMRTB1Q96MA1 342 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 FYTTD1Q96QD9 318 aaKnown RBP10.4□□□□□ -0.74
SHMT2-230ENST00000557427 SPACA5Q96QH8 159 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 OR2V2Q96R30 315 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 TMEM59Q9BXS4 323 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 CST11Q9H112 138 aa10.4□□□□□ -0.74
SHMT2-230ENST00000557427 TENM3Q9P273 2699 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 hCG_38984A0A1B0GV85 526 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 MEIS3P1A6NDR6 274 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 TMEM235A6NFC5 223 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 SNRPGP15A8MWD9 76 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 ARPC1BO15143 372 aaKnown RBP10.39□□□□□ -0.75
SHMT2-230ENST00000557427 RAB3DO95716 219 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 MPIG6BO95866 241 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 CYB5AP00167 134 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 SULT1A3P0DMM9 295 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 SULT1A4P0DMN0 295 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 TNFRSF1AP19438 455 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 GATA3P23771 443 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 ACKR3P25106 362 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 ERP29P30040 261 aaKnown RBP10.39□□□□□ -0.75
SHMT2-230ENST00000557427 VEGFCP49767 419 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 NKX2-5P52952 324 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-230ENST00000557427 RPS27AP62979 156 aaKnown RBP10.39□□□□□ -0.75
SHMT2-230ENST00000557427 GK2Q14410 553 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-230ENST00000557427 MEF2DQ14814 521 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 ZMYND11Q15326 602 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 OR8B8Q15620 311 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 PNLIPRP3Q17RR3 467 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 CDNFQ49AH0 187 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 CLVS2Q5SYC1 327 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 FAAP20Q6NZ36 180 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 GLDNQ6ZMI3 551 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-230ENST00000557427 FAM89BQ8N5H3 189 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 CHST4Q8NCG5 386 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 DEFB108BQ8NET1 73 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 OR10AD1Q8NGE0 317 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 OR56B1Q8NGI3 324 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 TECTBQ96PL2 329 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 GAL3ST1Q99999 423 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 GPN1Q9HCN4 374 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-230ENST00000557427 TMEM106BQ9NUM4 274 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 TMEM100Q9NV29 134 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 IL19Q9UHD0 177 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 PAIP2BQ9ULR5 123 aaKnown RBP10.39□□□□□ -0.75
SHMT2-230ENST00000557427 PPP1R3CQ9UQK1 317 aa10.39□□□□□ -0.75
SHMT2-230ENST00000557427 A0A0A6YYD4 124 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 F5H5P2 479 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 J3QW42 95 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 TIMM23O14925 209 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 ZNF205O95201 554 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 CD3DP04234 171 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 TBPP20226 339 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 MPZP25189 248 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 LCN2P80188 198 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 FAM3AP98173 230 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 VAX1Q5SQQ9 334 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-230ENST00000557427 LHFPL2Q6ZUX7 228 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 TRAPPC6BQ86SZ2 158 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 TMEM104Q8NE00 496 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 OR11H7Q8NGC8 314 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 OR2AE1Q8NHA4 323 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 TNFAIP8L1Q8WVP5 186 aa10.38□□□□□ -0.75
SHMT2-230ENST00000557427 RAB39BQ96DA2 213 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms