RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 LSM10Q969L4 123 aaKnown RBP7.88□□□□□ -1.15
SYNE3-205ENST00000557275 AICDAQ9GZX7 198 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 LTBP3Q9NS15 1303 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 ANKRD20A5PA0PJZ0 165 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 M0R1B8 84 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 GJB3O75712 270 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 HPXP02790 462 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 DSCR4P56555 118 aaPredicted RBP7.88□□□□□ -1.15
SYNE3-205ENST00000557275 RPL18Q07020 188 aaKnown RBP7.88□□□□□ -1.15
SYNE3-205ENST00000557275 FAHD1Q6P587 224 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 PITX3O75364 302 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 TSPOP30536 169 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 CDKN3Q16667 212 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 TMEM78Q5T7P6 136 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 TM4SF18Q96CE8 201 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 MEGF10Q96KG7 1140 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 KBTBD11-OT1A0A1B0GTJ5 212 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 PLPP2O43688 288 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 SFTPCP11686 197 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 ANKRD37Q7Z713 158 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 LPAR2Q9HBW0 351 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 GLRX2Q9NS18 164 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 WDR81Q562E7 1941 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 CTDSPLO15194 276 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 PDCD6O75340 191 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 EDN3P14138 238 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 ACVR1Q04771 509 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 C6orf15Q6UXA7 325 aaPredicted RBP7.88□□□□□ -1.15
SYNE3-205ENST00000557275 AUNIPQ9H7T9 357 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 OR51B4Q9Y5P0 310 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 TOPAZ1Q8N9V7 1692 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 H3BP45 60 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 RAB29O14966 203 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 RAB1CQ92928 201 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 DNAJB12Q9NXW2 375 aaKnown RBP7.88□□□□□ -1.15
SYNE3-205ENST00000557275 PCSK6P29122 969 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 CACNG7P62955 275 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 WDR25Q64LD2 544 aaPredicted RBP7.88□□□□□ -1.15
SYNE3-205ENST00000557275 OR13C6PQ8NH95 151 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 ZNF385DQ9H6B1 395 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 PHLDA3Q9Y5J5 127 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 ITGB4P16144 1822 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 TRAV38-1A0A0B4J264 116 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 RNASE1P07998 156 aaKnown RBP7.88□□□□□ -1.15
SYNE3-205ENST00000557275 KCNAB1Q14722 419 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 OR4P4Q8NGL7 312 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 RCC2Q9P258 522 aaKnown RBP7.88□□□□□ -1.15
SYNE3-205ENST00000557275 MGPP08493 103 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 ZNF735P0CB33 412 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 SIX1Q15475 284 aaPredicted RBP7.88□□□□□ -1.15
SYNE3-205ENST00000557275 TEX30Q5JUR7 227 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 OR10AC1Q8NH08 325 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 TIMP4Q99727 224 aa7.88□□□□□ -1.15
SYNE3-205ENST00000557275 H3BQ15 152 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 C5P01031 1676 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 LINC01549A6NIU2 74 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 MKRN2OSH3BPM6 223 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 OR2A4O95047 310 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 PRSS2P07478 247 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 OR2A7Q96R45 310 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 HAPLN2Q9GZV7 340 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 C20orf141Q9NUB4 165 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 EMCNQ9ULC0 261 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 HMGN4O00479 90 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 FABP5Q01469 135 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 C15orf39Q6ZRI6 1047 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 OR10V1Q8NGI7 309 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 TMEM174Q8WUU8 243 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 SDF2Q99470 211 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 RTN4RL1Q86UN2 441 aaPredicted RBP7.87□□□□□ -1.15
SYNE3-205ENST00000557275 SPNS2Q8IVW8 549 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 PIANPQ8IYJ0 282 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 MRGPRX3Q96LB0 322 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 FCGR3AP08637 254 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 OR10J6PQ8NGY7 276 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 TMEM140Q9NV12 185 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 H7C2G1 150 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 MFAP2P55001 183 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 RIPPLY2Q5TAB7 128 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 EBLN2Q6P2I7 272 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 FAM216AQ8WUB2 273 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 ASIPP42127 132 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 LINC01559Q495D7 138 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 NIT1Q86X76 327 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 SGMS2Q8NHU3 365 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 BCL2P10415 239 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 IER3P46695 156 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 PSG5Q15238 335 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 DLEU7Q6UYE1 221 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 ANAPC13Q9BS18 74 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 MARCH3Q86UD3 253 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 SLC25A40Q8TBP6 338 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 HHIPQ96QV1 700 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 NEURL2Q9BR09 285 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 AKIRIN1Q9H9L7 192 aaPredicted RBP7.87□□□□□ -1.15
SYNE3-205ENST00000557275 OR11H12B2RN74 326 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 MOSPD3O75425 235 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 MMP16P51512 607 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 TMEM25Q86YD3 366 aa7.87□□□□□ -1.15
SYNE3-205ENST00000557275 SLC16A11Q8NCK7 471 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms