RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 OR56B2PQ8NGI1 322 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 OR4D10Q8NGI6 311 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 OR5D18Q8NGL1 313 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 OR5H2Q8NGV7 314 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 OR10K1Q8NGX5 313 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 MBD3L2Q8NHZ7 208 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 FAM57AQ8TBR7 257 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ZFAND1Q8TCF1 268 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ZNF431Q8TF32 576 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 NUDCD2Q8WVJ2 157 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ST8SIA4Q92187 359 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SNAPC3Q92966 411 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 STARD4Q96DR4 205 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ZNF75AQ96N20 296 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 FYTTD1Q96QD9 318 aaKnown RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 OR2A7Q96R45 310 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SLC6A7Q99884 636 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 DHRS9Q9BPW9 319 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 MICU1Q9BPX6 476 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SLX1AQ9BQ83 275 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 NICN1Q9BSH3 213 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SCNM1Q9BWG6 230 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 PAPOLGQ9BWT3 736 aaKnown RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 GON7Q9BXV9 100 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 BEX2Q9BXY8 128 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ZNF436Q9C0F3 470 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 TINAGL1Q9GZM7 467 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 RIMS4Q9H426 269 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 BEX1Q9HBH7 125 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SPACA1Q9HBV2 294 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ZNF71Q9NQZ8 489 aaPredicted RBP3.79□□□□□ -1.8
SRP54-212ENST00000556992 DKK4Q9UBT3 224 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 POU2F3Q9UKI9 436 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ANAPC10Q9UM13 185 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 AMDHD2Q9Y303 409 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 SPEF1Q9Y4P9 236 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 NPTNQ9Y639 398 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 AHCTF1Q8WYP5 2266 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 ADAMTS9Q9P2N4 1935 aa3.79□□□□□ -1.8
SRP54-212ENST00000556992 IGKV1-12A0A0C4DH73 117 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 A0A1W2PP11 408 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 OR5H1A6NKK0 313 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 CEACAM18A8MTB9 384 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 H7C1Q1 480 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 K7ENP7 123 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 SPRY1O43609 319 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 ANGPTL7O43827 346 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 PDCD6O75340 191 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 RAD51DO75771 328 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 TNFSF13O75888 250 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 LYZL6O75951 148 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 WISP2O76076 250 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 RGS11O94810 467 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 IGKV1D-12P01611 117 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 PMP2P02689 132 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 ACAA1P09110 424 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 GIPP09681 153 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 CTXN2P0C2S0 81 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 OR4E1P0C645 316 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 ZNF35P13682 527 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 HLA-GP17693 338 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 CXCL3P19876 107 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 COX5AP20674 150 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 DTYMKP23919 212 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 GABRR1P24046 479 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 CEACAM8P31997 349 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 HRH1P35367 487 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 OPRM1P35372 400 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 WNT5AP41221 380 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 PI4KAP42356 2102 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 HAAOP46952 286 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 GPM6AP51674 278 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 NKX2-5P52952 324 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 PPP1CBP62140 327 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 HOXA4Q00056 320 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 MZT1Q08AG7 82 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 IL24Q13007 206 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 RBM39Q14498 530 aaKnown RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 NDUFA5Q16718 116 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 MICBQ29980 383 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 FAM76BQ5HYJ3 339 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 DMRTC1Q5HYR2 192 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 NHLRC3Q5JS37 347 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 ATPAF1Q5TC12 328 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 OR52W1Q6IF63 320 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 FAAP20Q6NZ36 180 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 DHRS11Q6UWP2 260 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 BHLHA15Q7RTS1 189 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 OVCH2Q7RTZ1 564 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 C6orf201Q7Z4U5 140 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 TMED4Q7Z7H5 227 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 LINC00596Q86U02 117 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 Q8IYB0 196 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 MUC20Q8N307 709 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 C12orf45Q8N5I9 185 aaPredicted RBP3.78□□□□□ -1.8
SRP54-212ENST00000556992 GVQW1Q8N7I0 195 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 ZNF611Q8N823 705 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 WDR31Q8NA23 367 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 UXS1Q8NBZ7 420 aa3.78□□□□□ -1.8
SRP54-212ENST00000556992 TMEM185AQ8NFB2 350 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms