RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 A0A1W2PP11 408 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 HSPB6O14558 160 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 CLPXO76031 633 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 PAHP00439 452 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 IGHV4-59P01825 116 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 HKR1P10072 659 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 KCNJ3P48549 501 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 MPV17LQ2QL34 196 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 AWAT2Q6E213 333 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 OR13D1Q8NGV5 346 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 MRPS24Q96EL2 167 aaKnown RBP18.61■□□□□ 0.57
TDP1-216ENST00000556867 AJUBAQ96IF1 538 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 YTHDF1Q9BYJ9 559 aaKnown RBP18.61■□□□□ 0.57
TDP1-216ENST00000556867 CHIAQ9BZP6 476 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 PPIL3Q9H2H8 161 aaKnown RBP18.61■□□□□ 0.57
TDP1-216ENST00000556867 GAL3ST2Q9H3Q3 398 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 NCOR1P1Q9H4R4 102 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 TAS2R3Q9NYW6 316 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 SESN1Q9Y6P5 492 aa18.61■□□□□ 0.57
TDP1-216ENST00000556867 GEMIN2O14893 280 aaKnown RBP18.6■□□□□ 0.57
TDP1-216ENST00000556867 OR7C1O76099 320 aaPredicted RBP18.6■□□□□ 0.57
TDP1-216ENST00000556867 TMEM91Q6ZNR0 172 aa18.6■□□□□ 0.57
TDP1-216ENST00000556867 BEND2Q8NDZ0 799 aa18.6■□□□□ 0.57
TDP1-216ENST00000556867 FOXRED1Q96CU9 486 aaPredicted RBP18.6■□□□□ 0.57
TDP1-216ENST00000556867 DPAGT1Q9H3H5 408 aa18.6■□□□□ 0.57
TDP1-216ENST00000556867 TNFRSF19Q9NS68 423 aa18.6■□□□□ 0.57
TDP1-216ENST00000556867 ZNF581Q9P0T4 197 aa18.6■□□□□ 0.57
TDP1-216ENST00000556867 TENM1Q9UKZ4 2725 aa18.6■□□□□ 0.57
TDP1-216ENST00000556867 ODF3BA8MYP8 253 aa18.59■□□□□ 0.57
TDP1-216ENST00000556867 SRMP19623 302 aa18.59■□□□□ 0.57
TDP1-216ENST00000556867 GABRA5P31644 462 aa18.59■□□□□ 0.57
TDP1-216ENST00000556867 EMX1Q04741 257 aaPredicted RBP18.59■□□□□ 0.57
TDP1-216ENST00000556867 C12orf54Q6X4T0 127 aa18.59■□□□□ 0.57
TDP1-216ENST00000556867 SVOPQ8N4V2 548 aa18.59■□□□□ 0.57
TDP1-216ENST00000556867 SUMF2Q8NBJ7 301 aa18.59■□□□□ 0.57
TDP1-216ENST00000556867 OR11H6Q8NGC7 330 aa18.59■□□□□ 0.57
TDP1-216ENST00000556867 C17orf50Q8WW18 174 aa18.59■□□□□ 0.57
TDP1-216ENST00000556867 DPCDQ9BVM2 203 aaPredicted RBP18.59■□□□□ 0.57
TDP1-216ENST00000556867 OR6C3Q9NZP0 311 aa18.59■□□□□ 0.57
TDP1-216ENST00000556867 GHRLQ9UBU3 117 aa18.59■□□□□ 0.57
TDP1-216ENST00000556867 CD37P11049 281 aa18.58■□□□□ 0.56
TDP1-216ENST00000556867 C1orf100Q5SVJ3 147 aa18.58■□□□□ 0.56
TDP1-216ENST00000556867 RSBN1Q5VWQ0 802 aaPredicted RBP18.58■□□□□ 0.56
TDP1-216ENST00000556867 GLT8D1Q68CQ7 371 aa18.58■□□□□ 0.56
TDP1-216ENST00000556867 ZNF626Q68DY1 528 aa18.58■□□□□ 0.56
TDP1-216ENST00000556867 HEPN1Q6WQI6 88 aa18.58■□□□□ 0.56
TDP1-216ENST00000556867 PLPPR1Q8TBJ4 325 aa18.58■□□□□ 0.56
TDP1-216ENST00000556867 BARHL1Q9BZE3 327 aa18.58■□□□□ 0.56
TDP1-216ENST00000556867 SLITRK2Q9H156 845 aa18.58■□□□□ 0.56
TDP1-216ENST00000556867 ING3Q9NXR8 418 aa18.58■□□□□ 0.56
TDP1-216ENST00000556867 KIF25Q9UIL4 384 aa18.58■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A8PA6NJQ4 464 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 MMP23AO75900 390 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 ARL6IP5O75915 188 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 LGALS4P56470 323 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 RPL15P61313 204 aaKnown RBP18.57■□□□□ 0.56
TDP1-216ENST00000556867 FABP5Q01469 135 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 FOXL1Q12952 345 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 SSX1Q16384 188 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 TAF9Q16594 264 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 DYRK2Q92630 601 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 MEGF9Q9H1U4 602 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 TMEM133Q9H2Q1 129 aa18.57■□□□□ 0.56
TDP1-216ENST00000556867 RCC2Q9P258 522 aaKnown RBP18.57■□□□□ 0.56
TDP1-216ENST00000556867 TBL2Q9Y4P3 447 aaKnown RBP18.57■□□□□ 0.56
TDP1-216ENST00000556867 MEIKINA0A087WXM9 373 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 IGHV2-26A0A0B4J1V2 119 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 BTBD17A6NE02 478 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 FAM181BA6NEQ2 426 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 ZNF729A6NN14 1252 aaPredicted RBP18.56■□□□□ 0.56
TDP1-216ENST00000556867 ARG1P05089 322 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 UBBP0CG47 229 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 MGMTP16455 207 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 AANATQ16613 207 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 AWAT1Q58HT5 328 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 PRAMEF5Q5TYX0 476 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 OR52W1Q6IF63 320 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 SPARTQ8N0X7 666 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 TMEM104Q8NE00 496 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 OR5R1Q8NH85 324 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 BANF2Q9H503 90 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 SPACA1Q9HBV2 294 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 NDUFB11Q9NX14 153 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 VPREB3Q9UKI3 123 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 LRRC42Q9Y546 428 aa18.56■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A10PA6NDY2 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A18PA6NE21 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A16PA6NEW6 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A20PA6NIJ5 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A7PA6NKC0 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A22PA8MWA6 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A12PA8MX19 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A5PA8MXJ8 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A23PA8MXZ1 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 GPR137BO60478 399 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A15PP0C7V4 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A13PP0C7W8 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A14PP0C7W9 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 FAM90A24PP0C7X0 464 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 CGB3P0DN86 165 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms