RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 CCNKO75909 580 aa11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 LHBP01229 141 aa11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 PSG2P11465 335 aa11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 APOBEC3AP31941 199 aaPredicted RBP11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 TAS2R46P59540 309 aa11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 CD83Q01151 205 aa11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 CDK10Q15131 360 aa11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 SPIN3Q5JUX0 258 aa11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 GLDNQ6ZMI3 551 aaPredicted RBP11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 ST6GAL2Q96JF0 529 aa11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 FYTTD1Q96QD9 318 aaKnown RBP11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 SPACA1Q9HBV2 294 aa11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 SPTAN1Q13813 2472 aaKnown RBP11.6□□□□□ -0.55
EFCAB11-212ENST00000556639 DSCAMO60469 2012 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 IGKV1D-17A0A075B6S4 117 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 A0A1W2PPR1 153 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 OR5H8P0DN80 308 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 CXCL3P19876 107 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 GATA4P43694 442 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 RRAS2P62070 204 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 COL10A1Q03692 680 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 TPRX1Q8N7U7 411 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 DEFB108BQ8NET1 73 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 OR6F1Q8NGZ6 308 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 TERB2Q8NHR7 220 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 SLC25A21Q9BQT8 299 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 ZNF2Q9BSG1 426 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 RANGRFQ9HD47 186 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 EDARQ9UNE0 448 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 USP9XQ93008 2570 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 A0A1B0GW55 424 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 DUX4L2P0CJ85 424 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 DUX4L3P0CJ86 424 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 DUX4L4P0CJ87 422 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 DUX4L5P0CJ88 424 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 DUX4L6P0CJ89 424 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 DUX4L7P0CJ90 424 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 MECP2P51608 486 aaKnown RBP11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 HERPUD1Q15011 391 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 SMIM21Q3B7S5 101 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 ZNF672Q499Z4 452 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 ACTBL2Q562R1 376 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 ZNF660Q6AZW8 331 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 DUX4L9Q6RFH8 374 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 LHFPL1Q86WI0 220 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 ZNF808Q8N4W9 903 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 OR11H7Q8NGC8 314 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 DMRTB1Q96MA1 342 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 TMEM204Q9BSN7 226 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 ZNF286AQ9HBT8 521 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 DUX4Q9UBX2 424 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 PPP1R3CQ9UQK1 317 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 WIPI2Q9Y4P8 454 aa11.59□□□□□ -0.55
EFCAB11-212ENST00000556639 IGKV1-6A0A0C4DH72 117 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 KNG1P01042 644 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 SELLP14151 372 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 TNFSF4P23510 183 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 PRDX2P32119 198 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 CFHR2P36980 270 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 GABRA2P47869 451 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 AESQ08117 197 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 RBM39Q14498 530 aaKnown RBP11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 ARRDC1Q8N5I2 433 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 OR10Z1Q8NGY1 313 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 SHARPINQ9H0F6 387 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 DYNLRB1Q9NP97 96 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 DNAJB11Q9UBS4 358 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 VSTM5A8MXK1 200 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 NFYAP23511 347 aaPredicted RBP11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 LMO1P25800 156 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 FIP1L1Q6UN15 594 aaKnown RBP11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 ZNF497Q6ZNH5 498 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 MUC20Q8N307 709 aaPredicted RBP11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 MUC15Q8N387 334 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 ASCC1Q8N9N2 400 aaKnown RBP11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 MED28Q9H204 178 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 RNF7Q9UBF6 113 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 ZNF69Q9UC07 566 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 MYO18BQ8IUG5 2567 aa11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 UTP20O75691 2785 aaKnown RBP11.58□□□□□ -0.56
EFCAB11-212ENST00000556639 RAI1Q7Z5J4 1906 aaPredicted RBP11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 SSNA1O43805 119 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 OR3A1P47881 315 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 SEC61A1P61619 476 aaKnown RBP11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 C2orf68Q2NKX9 166 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 C4orf46Q504U0 113 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 ZNRF1Q8ND25 227 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 COQ2Q96H96 371 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 DHRS9Q9BPW9 319 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 C5orf66Q9H5L9 145 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 NECAP2Q9NVZ3 263 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 SMLR1H3BR10 107 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 BET1O15155 118 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 CD55P08174 381 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 ADH4P08319 380 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 OR4E1P0C645 316 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 AKR1C4P17516 323 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 FCGR2CP31995 323 aa11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 NKX2-5P52952 324 aaPredicted RBP11.57□□□□□ -0.56
EFCAB11-212ENST00000556639 GRK1Q15835 563 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms