RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ANKRD20A5PA0PJZ0 165 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 ISPDA4D126 451 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 CD3DP04234 171 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 DAOP14920 347 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 LMO1P25800 156 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 MRPS15P82914 257 aaKnown RBP8.53□□□□□ -1.04
SRP54-208ENST00000555557 ARL6IP1Q15041 203 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 TEX36Q5VZQ5 186 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 C20orf204Q6ZNR8 217 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 OR4D10Q8NGI6 311 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 PLPPR1Q8TBJ4 325 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 CHAC2Q8WUX2 184 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 NEU4Q8WWR8 484 aaPredicted RBP8.53□□□□□ -1.04
SRP54-208ENST00000555557 CCL13Q99616 98 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 SHARPINQ9H0F6 387 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 IFT46Q9NQC8 304 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 ZNF222Q9UK12 451 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 FBXO9Q9UK97 447 aaPredicted RBP8.53□□□□□ -1.04
SRP54-208ENST00000555557 MAB21L2Q9Y586 359 aa8.53□□□□□ -1.04
SRP54-208ENST00000555557 RAI1Q7Z5J4 1906 aaPredicted RBP8.53□□□□□ -1.04
SRP54-208ENST00000555557 SPG11Q96JI7 2443 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 TRAV39A0A0B4J263 110 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 MEX3AA1L020 520 aaKnown RBP8.52□□□□□ -1.04
SRP54-208ENST00000555557 IFNL4K9M1U5 179 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 OVOL3O00110 214 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 LGALS8O00214 317 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 RP2O75695 350 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 MT-ND4P03905 459 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 MUC1P15941 1255 aaPredicted RBP8.52□□□□□ -1.04
SRP54-208ENST00000555557 ZMYND11Q15326 602 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 CARTPTQ16568 116 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 STUMQ69YW2 141 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 FAM216BQ8N7L0 139 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 TPRX1Q8N7U7 411 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 OR4K15Q8NH41 348 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 SETD6Q8TBK2 473 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 CCDC107Q8WV48 283 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 SNAPC3Q92966 411 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 MED30Q96HR3 178 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 CCL19Q99731 98 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.04
SRP54-208ENST00000555557 CHMP1AQ9HD42 196 aaPredicted RBP8.52□□□□□ -1.04
SRP54-208ENST00000555557 TRAV38-1A0A0B4J264 116 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 M0QYG6 137 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 LYRM1O43325 122 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 ZNF737O75373 536 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 CA11O75493 328 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 FCGR3AP08637 254 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 OR3A1P47881 315 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 RFX2P48378 723 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 DEFA1P59665 94 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 DEFA3P59666 94 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 KRTAP10-9P60411 292 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 ACTBP60709 375 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 ACTG1P63261 375 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 AESQ08117 197 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 ASAH1Q13510 395 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 RBM39Q14498 530 aaKnown RBP8.52□□□□□ -1.05
SRP54-208ENST00000555557 AVPI1Q5T686 147 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 GDPD3Q7L5L3 318 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 GLCCI1Q86VQ1 547 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 HOGA1Q86XE5 327 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 FGFRL1Q8N441 504 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 IGFBPL1Q8WX77 278 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 GAFA1Q96PS6 74 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 HRASLSQ9HDD0 168 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 C12orf4Q9NQ89 552 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 PLEKHA6Q9Y2H5 1048 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 NAV2Q8IVL1 2488 aa8.52□□□□□ -1.05
SRP54-208ENST00000555557 FBN2P35556 2912 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 H3BUI4 141 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 TMPRSS2O15393 492 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 ECDO95905 644 aaPredicted RBP8.51□□□□□ -1.05
SRP54-208ENST00000555557 NAPSAO96009 420 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 F12P00748 615 aaPredicted RBP8.51□□□□□ -1.05
SRP54-208ENST00000555557 PMP2P02689 132 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 CSN2P05814 226 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 CSF1P09603 554 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 SPNP16150 400 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 BTG1P62324 171 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 EDDM3AQ14507 147 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 GRK1Q15835 563 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 LYPD2Q6UXB3 125 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 NRARPQ7Z6K4 114 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 BEST4Q8NFU0 473 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 OR4C16Q8NGL9 310 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 MRPL30Q8TCC3 161 aaKnown RBP8.51□□□□□ -1.05
SRP54-208ENST00000555557 TMEM246Q9BRR3 403 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 TINAGL1Q9GZM7 467 aaPredicted RBP8.51□□□□□ -1.05
SRP54-208ENST00000555557 DLL4Q9NR61 685 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 MCUBQ9NWR8 336 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 ANAPC10Q9UM13 185 aa8.51□□□□□ -1.05
SRP54-208ENST00000555557 ZNF736B4DX44 427 aaPredicted RBP8.5□□□□□ -1.05
SRP54-208ENST00000555557 GLAP06280 429 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 RCC1P18754 421 aaPredicted RBP8.5□□□□□ -1.05
SRP54-208ENST00000555557 BTCP35070 178 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 HRH1P35367 487 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 CBX5P45973 191 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 GLIPR1P48060 266 aa8.5□□□□□ -1.05
SRP54-208ENST00000555557 EFNA4P52798 201 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms