RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 OR8B8Q15620 311 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 TSC22D1Q15714 1073 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 MICBQ29980 383 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 LY6G6FQ5SQ64 297 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 TMEM42Q69YG0 159 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 C11orf87Q6NUJ2 197 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 KCNRGQ8N5I3 272 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 ZSCAN4Q8NAM6 433 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-216ENST00000554975 CSNK2A3Q8NEV1 391 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 LRRC20Q8TCA0 184 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 ARHGAP5-AS1Q96IT6 56 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 SPACA5Q96QH8 159 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 PECRQ9BY49 303 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 NMES1Q9C002 83 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 BANF2Q9H503 90 aa9.48□□□□□ -0.89
SHMT2-216ENST00000554975 ELL3Q9HB65 397 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-216ENST00000554975 MYEF2Q9P2K5 600 aaKnown RBP9.48□□□□□ -0.89
SHMT2-216ENST00000554975 OR5H14A6NHG9 310 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 J3QW42 95 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 SOCS1O15524 211 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 NRASP01111 189 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 TMEM225BP0DP42 221 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 SNU13P55769 128 aaKnown RBP9.47□□□□□ -0.89
SHMT2-216ENST00000554975 MTCP1P56278 107 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 ARPC4P59998 168 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 EIF5AP63241 154 aaKnown RBP9.47□□□□□ -0.89
SHMT2-216ENST00000554975 MALLQ13021 153 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 UBE2V2Q15819 145 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 ZNF672Q499Z4 452 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-216ENST00000554975 NHLRC3Q5JS37 347 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 PLAC9Q5JTB6 97 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 TOR2AQ5JU69 321 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 NCMAPQ5T1S8 102 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 DCAF12L2Q5VW00 463 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 OR52W1Q6IF63 320 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 ZNF774Q6NX45 483 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 TFAP2EQ6VUC0 442 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 ASCL4Q6XD76 172 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 ZNF546Q86UE3 836 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 LHFPL1Q86WI0 220 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 GVQW1Q8N7I0 195 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 INO80EQ8NBZ0 244 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-216ENST00000554975 OR5AP2Q8NGF4 316 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 NPRL2Q8WTW4 380 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 SPSB4Q96A44 273 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 CHODLQ9H9P2 273 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 BCO1Q9HAY6 547 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 EHFQ9NZC4 300 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 PRSS50Q9UI38 385 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 NUP50Q9UKX7 468 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 TRRAPQ9Y4A5 3859 aa9.47□□□□□ -0.89
SHMT2-216ENST00000554975 PIGBOS1A0A0B4J2F0 54 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 hCG_1807616A0A1W2PRN6 198 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 OR2AT4A6NND4 320 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 SIX6O95475 246 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 SFT2D2O95562 160 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 IGHV3-9P01782 118 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 PMP2P02689 132 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 MPGP29372 298 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 ARR3P36575 388 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 GLP1RP43220 463 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 P2RX3P56373 397 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 SNAI3Q3KNW1 292 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 FAM120AOSQ5T036 256 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 CYB5R2Q6BCY4 276 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 ACOT7LQ6ZUV0 252 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 DTX2Q86UW9 622 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 CCDC36Q8IYA8 594 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 SAXO1Q8IYX7 474 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 ZNF525Q8N782 197 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-216ENST00000554975 OR5D18Q8NGL1 313 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 MARCH1Q8TCQ1 289 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 APH1AQ96BI3 265 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 SGK3Q96BR1 496 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 S100PBPQ96BU1 408 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 C1QTNF5Q9BXJ0 243 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 WNT5BQ9H1J7 359 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 SLC25A32Q9H2D1 315 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 GPR173Q9NS66 373 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 PLEKHJ1Q9NW61 149 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 TNFSF18Q9UNG2 199 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 GPR132Q9UNW8 380 aa9.46□□□□□ -0.9
SHMT2-216ENST00000554975 C5orf51A6NDU8 294 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 DBX1A6NMT0 343 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 I3L521 148 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 SHOXO15266 292 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 LYZL6O75951 148 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 HTR3BO95264 441 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 CTSDP07339 412 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-216ENST00000554975 CD3EP07766 207 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 DBHP09172 617 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 PGAM2P15259 253 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 AKR1C4P17516 323 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 RBMXP38159 391 aaKnown RBP9.45□□□□□ -0.9
SHMT2-216ENST00000554975 TMEM50BP56557 158 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 PSG4Q00888 419 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 PLP2Q04941 152 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 BAMBIQ13145 260 aa9.45□□□□□ -0.9
SHMT2-216ENST00000554975 P2RY6Q15077 328 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms