RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TRBV6-6A0A0A6YYG2 114 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 TMEM82A0PJX8 343 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 MEIOCA2RUB1 952 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 TMPRSS2O15393 492 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 ADAM20O43506 726 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 NDUFB3O43676 98 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 ORC5O43913 435 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 SSX4O60224 188 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 PSPNO60542 156 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 NDUFS7O75251 213 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 TK1P04183 234 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 TBPP20226 339 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 GIFP27352 417 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 SRSF7Q16629 238 aaKnown RBP eCLIP11.99□□□□□ -0.49
SHOX2-206ENST00000554685 LRRC10Q5BKY1 277 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF57Q68EA5 555 aaPredicted RBP11.99□□□□□ -0.49
SHOX2-206ENST00000554685 CLEC2AQ6UVW9 174 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF497Q6ZNH5 498 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 C17orf107Q6ZR85 190 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 GDPD3Q7L5L3 318 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 NLRC3Q7RTR2 1065 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 BPIFB2Q8N4F0 458 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 TMEM185AQ8NFB2 350 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 OR4S1Q8NGB4 309 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 NINJ1Q92982 152 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 LIME1Q9H400 295 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 NCOR1P1Q9H4R4 102 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 MIOXQ9UGB7 285 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 ELF5Q9UKW6 265 aaPredicted RBP11.99□□□□□ -0.49
SHOX2-206ENST00000554685 ANAPC10Q9UM13 185 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 MAB21L2Q9Y586 359 aa11.99□□□□□ -0.49
SHOX2-206ENST00000554685 HELZ2Q9BYK8 2649 aaKnown RBP11.98□□□□□ -0.49
SHOX2-206ENST00000554685 A0A1W2PQ09 198 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 TNFRSF13BO14836 293 aaPredicted RBP11.98□□□□□ -0.49
SHOX2-206ENST00000554685 SSX5O60225 188 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 NAPSAO96009 420 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 FCGR3AP08637 254 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 ERP29P30040 261 aaKnown RBP11.98□□□□□ -0.49
SHOX2-206ENST00000554685 FAUP35544 74 aaKnown RBP11.98□□□□□ -0.49
SHOX2-206ENST00000554685 TAS2R19P59542 299 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 DYRK1AQ13627 763 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 ATXN7L3Q14CW9 347 aaPredicted RBP11.98□□□□□ -0.49
SHOX2-206ENST00000554685 ACTBL2Q562R1 376 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 KRBOX4Q5JUW0 171 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 RTN4RL2Q86UN3 420 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 HOGA1Q86XE5 327 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 LRRC75A-AS1Q8N1F1 130 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 GAPTQ8N292 157 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 TMEM229BQ8NBD8 167 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 ZNRF1Q8ND25 227 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 SETD6Q8TBK2 473 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 COX4I2Q96KJ9 171 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 C7orf50Q9BRJ6 194 aaKnown RBP11.98□□□□□ -0.49
SHOX2-206ENST00000554685 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF286AQ9HBT8 521 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 KLK11Q9UBX7 282 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 PCDHB10Q9UN67 800 aa11.98□□□□□ -0.49
SHOX2-206ENST00000554685 KIR2DS1A0A191URI9 304 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 ANKRD20A5PA0PJZ0 165 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 MEIS3P1A6NDR6 274 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 CENPXA8MT69 81 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 CEACAM18A8MTB9 384 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 RPS2P15880 293 aaKnown RBP11.97□□□□□ -0.49
SHOX2-206ENST00000554685 NAT1P18440 290 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 AMY2BP19961 511 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 RBMXP38159 391 aaKnown RBP11.97□□□□□ -0.49
SHOX2-206ENST00000554685 KIR2DS4P43632 304 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 TAS2R46P59540 309 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 KIR2DS1Q14954 304 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 AVPI1Q5T686 147 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 C6orf183Q5T699 404 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 RSBN1Q5VWQ0 802 aaPredicted RBP11.97□□□□□ -0.49
SHOX2-206ENST00000554685 STEAP3Q658P3 488 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 TRAT1Q6PIZ9 186 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 Q6ZS49 121 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 LYSMD2Q8IV50 215 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF525Q8N782 197 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 FAM216BQ8N7L0 139 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 OR8B3Q8NGG8 313 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 PLPPR1Q8TBJ4 325 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 MRPL30Q8TCC3 161 aaKnown RBP11.97□□□□□ -0.49
SHOX2-206ENST00000554685 FAM168AQ92567 244 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 DYRK2Q92630 601 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 MBD6Q96DN6 1003 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 NEIL1Q96FI4 390 aaPredicted RBP11.97□□□□□ -0.49
SHOX2-206ENST00000554685 PERPQ96FX8 193 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 OR8B2Q96RD0 313 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 ST6GALNAC5Q9BVH7 336 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 SHARPINQ9H0F6 387 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 RAB9BQ9NP90 201 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 SLC25A10Q9UBX3 287 aaPredicted RBP11.97□□□□□ -0.49
SHOX2-206ENST00000554685 LPAR3Q9UBY5 353 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 TRAPPC2LQ9UL33 140 aa11.97□□□□□ -0.49
SHOX2-206ENST00000554685 NAP1L6A6NFF2 107 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF736B4DX44 427 aaPredicted RBP11.96□□□□□ -0.49
SHOX2-206ENST00000554685 LANCL1O43813 399 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 MT-ND4P03905 459 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 TFF1P04155 84 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 AKAIN1P0CW23 69 aa11.96□□□□□ -0.49
SHOX2-206ENST00000554685 NPY4RP50391 375 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms