RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ARF6P62330 175 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 TWIST1Q15672 202 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 VMA21Q3ZAQ7 101 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SLC25A53Q5H9E4 307 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 ZNF691Q5VV52 312 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 RPUSD3Q6P087 351 aaKnown RBP2.93□□□□□ -1.94
SYNE2-212ENST00000554584 OR52M1Q8NGK5 317 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 NAA60Q9H7X0 242 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 DUOX1Q9NRD9 1551 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 IGHV4-4A0A075B6R2 117 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 TEX50A0A1B0GTY4 177 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 CLEC18AA5D8T8 446 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SOD3P08294 240 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 H2AFB1P0C5Y9 115 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 AOAHP28039 575 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 HBG1P69891 147 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 HBG2P69892 147 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SH2D5Q6ZV89 423 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 CLEC18CQ8NCF0 446 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SLC25A40Q8TBP6 338 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 PHLDA1Q8WV24 401 aaPredicted RBP2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SPSB4Q96A44 273 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SLC25A46Q96AG3 418 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 DDOQ99489 341 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 DCAF13Q9NV06 445 aaKnown RBP2.93□□□□□ -1.94
SYNE2-212ENST00000554584 BDP1A6H8Y1 2624 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 ARFGEF1Q9Y6D6 1849 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 TIMM23O14925 209 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 GLRXP35754 106 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 GLYATL3Q5SZD4 288 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 GPR82Q96P67 336 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 DIRC2Q96SL1 478 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SLC35A3Q9Y2D2 325 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 COL22A1Q8NFW1 1626 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 FAM24AA6NFZ4 105 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 NUBP1P53384 320 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 TIAL1Q01085 375 aaKnown RBP eCLIP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 OR5R1Q8NH85 324 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 RTN4IP1Q8WWV3 396 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 LINC00470Q9BZP3 86 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 GABRPO00591 440 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SELENOWP63302 87 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 MRPS10P82664 201 aaKnown RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 WDR73Q6P4I2 378 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 GJC3Q8NFK1 279 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 OPALINQ96PE5 141 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 DUX3Q96PT4 197 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 TRAPPC1Q9Y5R8 145 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 TRGV10A0A0A0MS01 117 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 LY6HO94772 140 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 CTSGP08311 255 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 LHFPL5Q8TAF8 219 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 PGLYRP4Q96LB8 373 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 UCN2Q96RP3 112 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 VGLL1Q99990 258 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 NECAP2Q9NVZ3 263 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 GPR55Q9Y2T6 319 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 CYC1P08574 325 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SKP2Q13309 424 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 FXYD3Q14802 87 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 TOMM34Q15785 309 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 ZNF114Q8NC26 417 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 IGSF5Q9NSI5 407 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SLC17A2O00624 439 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 HOXA3O43365 443 aaPredicted RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 BCL3P20749 454 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 FAM209AQ5JX71 171 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 BHLHA9Q7RTU4 235 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 TAF15Q92804 592 aaKnown RBP eCLIP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 CXXC4Q9H2H0 198 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 ZFYVE26Q68DK2 2539 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 RGS13O14921 159 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SNRPGP62308 76 aaKnown RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SLC16A11Q8NCK7 471 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 RHOXF1Q8NHV9 184 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 LSM2Q9Y333 95 aaKnown RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 LOC100289279A0A1B0GTE1 492 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 TCRBV4S1A1TA0A5B7 111 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 NRASP01111 189 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 IL4P05112 153 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 LAX1Q8IWV1 398 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 RHNO1Q9BSD3 238 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SPNS1Q9H2V7 528 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 LHX3Q9UBR4 397 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 ST8SIA3O43173 380 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 GNG7O60262 68 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 CX3CL1P78423 397 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 FAM89BQ8N5H3 189 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 OR4S1Q8NGB4 309 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 GHSRQ92847 366 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 A0A1B0GU03 582 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 GPR75O95800 540 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 MT-ATP6P00846 226 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 GAPDHP04406 335 aaKnown RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 ZNF30P17039 623 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SPI1P17947 270 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 SMAD4Q13485 552 aaKnown RBP2.92□□□□□ -1.94
SYNE2-212ENST00000554584 C1QL4Q86Z23 238 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 TM4SF19Q96DZ7 209 aa2.92□□□□□ -1.94
SYNE2-212ENST00000554584 ZBP1Q9H171 429 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms