RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 OR1N2Q8NGR9 330 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 OR5K2Q8NHB8 316 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 JOSD2Q8TAC2 188 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 SCAMP5Q8TAC9 235 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 WIPF2Q8TF74 440 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 NUDCD2Q8WVJ2 157 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 RXFP2Q8WXD0 754 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 DNASE2BQ8WZ79 361 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 PNPLA2Q96AD5 504 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 SLC25A46Q96AG3 418 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 TMEM18Q96B42 140 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 CXorf40BQ96DE9 158 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 WDR34Q96EX3 536 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 ZNF419Q96HQ0 510 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 HPDLQ96IR7 371 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 LRRC3BQ96PB8 259 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 CIB3Q96Q77 187 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 PAAF1Q9BRP4 392 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 RBM24Q9BX46 236 aaKnown RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 LAT2Q9GZY6 243 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 CHST8Q9H2A9 424 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 PLK3Q9H4B4 646 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 TMEM27Q9HBJ8 222 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 TAF9BQ9HBM6 251 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 HHATLQ9HCP6 504 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 MRPL16Q9NX20 251 aaKnown RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 ANKRD10Q9NXR5 420 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 CNOT2Q9NZN8 540 aaKnown RBP3.79□□□□□ -1.8
ATXN3-227ENST00000554491 PIPOXQ9P0Z9 390 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 HSPB8Q9UJY1 196 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 ERG28Q9UKR5 140 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 TRAPPC2LQ9UL33 140 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 GPR132Q9UNW8 380 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 OR10H1Q9Y4A9 318 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 HES2Q9Y543 173 aa3.79□□□□□ -1.8
ATXN3-227ENST00000554491 LRBAP50851 2863 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ZFHX3Q15911 3703 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 BOD1L1Q8NFC6 3051 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 A0A087WWC5 75 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TRAV38-1A0A0B4J264 116 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 KANTRA0A1W2PQU2 76 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 A0A1W2PRS3 328 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TCRBV7S3A2A0A539 114 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 PSMB11A5LHX3 300 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 RNF222A6NCQ9 220 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 MBD3L4A6NDZ8 208 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 MBD3L3A6NE82 208 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 OR2W5A6NFC9 320 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 CASTOR2A6NHX0 329 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 A8MZ25 164 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 C21orf140B9A014 251 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ZNF670-ZNF695F2Z2N8 137 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 C15orf65H3BRN8 121 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 J3QR89 54 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 RS1O15537 224 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 P2RX6O15547 441 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 KLK10O43240 276 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TNFSF14O43557 240 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 LATO43561 262 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TMPRSS11DO60235 418 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 VENTXO95231 258 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 FARS2O95363 451 aaKnown RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 HBZP02008 142 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 FGF3P11487 239 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ADORA2BP29275 332 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 HTR1FP30939 366 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ARRB2P32121 409 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ADRA1AP35348 466 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 AVPR1AP37288 418 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 SNCAP37840 140 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TNFSF9P41273 254 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 CDKN2AP42771 156 aaKnown RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TFPI2P48307 235 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 DNASE1L1P49184 302 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TCTAP57738 103 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TIRAPP58753 221 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TAS2R50P59544 299 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 UBE2KP61086 200 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 DYNLT1P63172 113 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 PAFAH1B2P68402 229 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 H3F3AP84243 136 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 PLCXD2Q0VAA5 305 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 OR2F1Q13607 317 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 PAFAH1B3Q15102 231 aaKnown RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 BATFQ16520 125 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TMEM183BQ1AE95 376 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 IAH1Q2TAA2 248 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TTLL9Q3SXZ7 439 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 ELFN2Q5R3F8 820 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TBPL2Q6SJ96 375 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 DHRS13Q6UX07 377 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TOMM20LQ6UXN7 152 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 APOOLQ6UXV4 268 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 SLC25A26Q70HW3 274 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 OR8I2Q8N0Y5 310 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 PNKDQ8N490 385 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 KCNRGQ8N5I3 272 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 TMEM217Q8N7C4 229 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 STPG4Q8N801 248 aa3.78□□□□□ -1.8
ATXN3-227ENST00000554491 AMER3Q8N944 861 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms