RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SLC31A2O15432 143 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 SERPINA5P05154 406 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 PGAM2P15259 253 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF14P17017 642 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-212ENST00000554467 IDH3GP51553 393 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-212ENST00000554467 OR8B8Q15620 311 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 SSX9Q7RTT3 188 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 SLAMF9Q96A28 289 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 SPSB1Q96BD6 273 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 PRDM14Q9GZV8 571 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 METTL9Q9H1A3 318 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 SHPKQ9UHJ6 478 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 ATRXP46100 2492 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 SHANK1Q9Y566 2161 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 NCOR2Q9Y618 2525 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF816-ZNF321PA0A0X1KG74 233 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 XRCC2O43543 280 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 AGFG2O95081 481 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 ERVS71-1P61550 626 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 DHRS11Q6UWP2 260 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 FAM89BQ8N5H3 189 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 CSNK2A3Q8NEV1 391 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 ASB13Q8WXK3 278 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 DCUN1D4Q92564 292 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 RRNAD1Q96FB5 475 aaKnown RBP10.04□□□□□ -0.8
SHMT2-212ENST00000554467 PHB2Q99623 299 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 IL36RNQ9UBH0 155 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 SLC7A11Q9UPY5 501 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 A0A1B0GWJ7 208 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 RNASEK-C17orf49H0YIS7 233 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 AP4M1O00189 453 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 MSTNO14793 375 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 KNG1P01042 644 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 GSTP1P09211 210 aaKnown RBP10.04□□□□□ -0.8
SHMT2-212ENST00000554467 IGHV1-2P23083 117 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 DUSP1P28562 367 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 RBMXP38159 391 aaKnown RBP10.04□□□□□ -0.8
SHMT2-212ENST00000554467 TAS2R60P59551 318 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 PRDX4Q13162 271 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 TMEM42Q69YG0 159 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 COLCA1Q6ZS62 124 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 C5orf24Q7Z6I8 188 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF611Q8N823 705 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 CCDC54Q8NEL0 328 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 SLC30A7Q8NEW0 376 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 STOML3Q8TAV4 291 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 TCTEX1D2Q8WW35 142 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 BCL2L2Q92843 193 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-212ENST00000554467 Q96M66 194 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 PRRT1Q99946 306 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 PTPRQQ9UMZ3 2332 aa10.04□□□□□ -0.8
SHMT2-212ENST00000554467 HSPB6O14558 160 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 SCGNO76038 276 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 APLNRP35414 380 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 OR3A2P47893 321 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 ID4P47928 161 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 FOXC1Q12948 553 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 OR2T2Q6IF00 324 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 IGFL2Q6UWQ7 119 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 C10orf35Q96D05 121 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF488Q96MN9 340 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 REPIN1Q9BWE0 567 aaKnown RBP10.03□□□□□ -0.8
SHMT2-212ENST00000554467 TOLLIPQ9H0E2 274 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 CLCF1Q9UBD9 225 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 FOXI3A8MTJ6 420 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-212ENST00000554467 ADAP1O75689 374 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 MT-ND4LP03901 98 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 CD5P06127 495 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 ARR3P36575 388 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 SERPINF1P36955 418 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 CAV2P51636 162 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 S100A10P60903 97 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 MEF2DQ14814 521 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 LHFPL2Q6ZUX7 228 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 RNF141Q8WVD5 230 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 TMEM68Q96MH6 324 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 NEU1Q99519 415 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 SULT4A1Q9BR01 284 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 HEATR1Q9H583 2144 aaKnown RBP10.03□□□□□ -0.8
SHMT2-212ENST00000554467 METTL8Q9H825 291 aaKnown RBP10.03□□□□□ -0.8
SHMT2-212ENST00000554467 ST3GAL6Q9Y274 331 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 IGHG3P01860 377 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 GLI4P10075 376 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 ALDH3B1P43353 468 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 MALLQ13021 153 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 NRN1LQ496H8 165 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 RPRMLQ8N4K4 120 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 OR5H2Q8NGV7 314 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 HPSE2Q8WWQ2 592 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 APOBEC3DQ96AK3 386 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-212ENST00000554467 GMPPAQ96IJ6 420 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-212ENST00000554467 AKR1E2Q96JD6 320 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 OCSTAMPQ9BR26 566 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 RGCCQ9H4X1 137 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 RPS10P5Q9NQ39 176 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 EHFQ9NZC4 300 aa10.03□□□□□ -0.8
SHMT2-212ENST00000554467 ZGRF1Q86YA3 2104 aa10.02□□□□□ -0.8
SHMT2-212ENST00000554467 DHRS7CA6NNS2 312 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 RAB5AP20339 215 aa10.02□□□□□ -0.81
SHMT2-212ENST00000554467 PMELP40967 661 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms