RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 TMED7-TICAM2A0A0A6YYA0 188 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 A0A0U1RQK1 487 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 LOC102725191A0A1B0GVB3 256 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 A0A1B0GW55 424 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 PRSS37A4D1T9 235 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 FTCDNL1E5RQL4 147 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 RNASEK-C17orf49H0YIS7 233 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 SULT1C2O00338 296 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 PLPP3O14495 311 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 TNFRSF13BO14836 293 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-226ENST00000554350 SPRY3O43610 288 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 SELENOFO60613 162 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 PEX14O75381 377 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 AHSA1O95433 338 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 DUS4LO95620 317 aaKnown RBP4.6□□□□□ -1.67
ATXN3-226ENST00000554350 PAHP00439 452 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 IL5P05113 134 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 ISG15P05161 165 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 GYPBP06028 91 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 GSTT2P0CG29 244 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 DUX4L2P0CJ85 424 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 DUX4L3P0CJ86 424 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 DUX4L5P0CJ88 424 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 DUX4L6P0CJ89 424 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 DUX4L7P0CJ90 424 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 OR8G3PP0DMU2 310 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 ZNF14P17017 642 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-226ENST00000554350 BTCP35070 178 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 NAA10P41227 235 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-226ENST00000554350 KLF3P57682 345 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-226ENST00000554350 OR10A3P58181 314 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 LINC00205P59089 165 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 EGFEM1PQ0D2K5 195 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 MESTQ5EB52 335 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 TCTEX1D4Q5JR98 221 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 FAM27D1Q5T7N8 215 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 C1orf140Q5VVS0 124 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 RGS7BPQ6MZT1 257 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-226ENST00000554350 DUX4L9Q6RFH8 374 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-226ENST00000554350 HDDC2Q7Z4H3 204 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 LRRTM1Q86UE6 522 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 OR6V1Q8N148 313 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 C10orf53Q8N6V4 93 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 YIPF7Q8N8F6 280 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 SPERTQ8NA61 448 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 WFDC9Q8NEX5 89 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 OR4C13Q8NGP0 309 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 OR5H6Q8NGV6 325 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 OR6K6Q8NGW6 343 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 OR2G2Q8NGZ5 317 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 ZNF671Q8TAW3 534 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 ZNRF4Q8WWF5 429 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 CAPSLQ8WWF8 208 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 TAAR8Q969N4 342 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 RASD2Q96D21 266 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 C4orf45Q96LM5 186 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 CITED2Q99967 270 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-226ENST00000554350 NUDT16L1Q9BRJ7 211 aaKnown RBP4.6□□□□□ -1.67
ATXN3-226ENST00000554350 PTDSS2Q9BVG9 487 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 GPR61Q9BZJ8 451 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 RANGRFQ9HD47 186 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-226ENST00000554350 DUX4Q9UBX2 424 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 LAMP5Q9UJQ1 280 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 VPREB3Q9UKI3 123 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 ING4Q9UNL4 249 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 B9D1Q9UPM9 204 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 TMED7Q9Y3B3 224 aa4.6□□□□□ -1.67
ATXN3-226ENST00000554350 IGLV1-36A0A0B4J1U3 117 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 ANKRD20A5PA0PJZ0 165 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 TMEM72A0PK05 275 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 SLC22A23A1A5C7 686 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 SMIM30A4D0T7 59 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 SNRPGP15A8MWD9 76 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 A8MXK9 166 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 XRCC3O43542 346 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 LANCL1O43813 399 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 SERPINI2O75830 405 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 OR6A2O95222 327 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 IGHV2-70P01814 119 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 CD2P06729 351 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 NPSP0C0P6 89 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 ANXA3P12429 323 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 C4BPBP20851 252 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 STOMP27105 288 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 FAUP35544 74 aaKnown RBP4.59□□□□□ -1.67
ATXN3-226ENST00000554350 DAP3P51398 398 aaKnown RBP4.59□□□□□ -1.67
ATXN3-226ENST00000554350 EFNB2P52799 333 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 HCCSP53701 268 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 ARF1P84077 181 aaKnown RBP4.59□□□□□ -1.67
ATXN3-226ENST00000554350 SLC17A1Q14916 467 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 GSG1Q2KHT4 349 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 ZNF260Q3ZCT1 412 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 METTL11BQ5VVY1 283 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 H1FNTQ75WM6 255 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-226ENST00000554350 GPAT4Q86UL3 456 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 CDH26Q8IXH8 852 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 PDZD9Q8IXQ8 264 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 SYNPRQ8TBG9 265 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 FCAMRQ8WWV6 532 aa4.59□□□□□ -1.67
ATXN3-226ENST00000554350 RGP1Q92546 391 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms