RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ATXN7L3Q14CW9 347 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-210ENST00000553950 ZNF79Q15937 498 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 CLEC12BQ2HXU8 276 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 ESCO2Q56NI9 601 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 TRIQKQ629K1 86 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 C17orf107Q6ZR85 190 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 ZNF554Q86TJ5 538 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 Q8N402 240 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 FAM216BQ8N7L0 139 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 DEDD2Q8WXF8 326 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 FAAP24Q9BTP7 215 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 PATZ1Q9HBE1 687 aaKnown RBP12.09□□□□□ -0.47
SHMT2-210ENST00000553950 OR6C3Q9NZP0 311 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 ZNF107Q9UII5 783 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-210ENST00000553950 AK3Q9UIJ7 227 aa12.09□□□□□ -0.47
SHMT2-210ENST00000553950 KIR2DS1A0A191URI9 304 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 A0A1W2PPH5 198 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 TMEM82A0PJX8 343 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 UBE2QL1A1L167 161 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 F5H0A9 414 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-210ENST00000553950 TNFRSF13BO14836 293 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-210ENST00000553950 PSPNO60542 156 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 ECDO95905 644 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-210ENST00000553950 INHBBP09529 407 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 KIR2DS4P43632 304 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 P2RX3P56373 397 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 HOXA4Q00056 320 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-210ENST00000553950 MEF2CQ06413 473 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-210ENST00000553950 KIR2DS1Q14954 304 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 PDCD1Q15116 288 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 SRSF7Q16629 238 aaKnown RBP eCLIP12.08□□□□□ -0.48
SHMT2-210ENST00000553950 KRBOX4Q5JUW0 171 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 C6orf183Q5T699 404 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 ZNF497Q6ZNH5 498 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 DNM1P46Q6ZS02 220 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 TRAPPC6BQ86SZ2 158 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 GAPTQ8N292 157 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 ZNRF1Q8ND25 227 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 GPX8Q8TED1 209 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 BORCS5Q969J3 196 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 ABHD1Q96SE0 405 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 ZMAT3Q9HA38 289 aaKnown RBP12.08□□□□□ -0.48
SHMT2-210ENST00000553950 CLN8Q9UBY8 286 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 KCNK7Q9Y2U2 307 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 MAB21L2Q9Y586 359 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 LRBAP50851 2863 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 NAV2Q8IVL1 2488 aa12.08□□□□□ -0.48
SHMT2-210ENST00000553950 CRYBG3Q68DQ2 2970 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 ABCA12Q86UK0 2595 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 VWC2LB2RUY7 222 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 RBBP9O75884 186 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 NAPSAO96009 420 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 FCGR3AP08637 254 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 CSF1P09603 554 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 GSTT2BP0CG30 244 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 NDUFB7P17568 137 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 TBPP20226 339 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 EDDM3BP56851 147 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 GNB2P62879 340 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 ACTBL2Q562R1 376 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 Q5PR19 223 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 RSBN1Q5VWQ0 802 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-210ENST00000553950 CD276Q5ZPR3 534 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 BPIFB2Q8N4F0 458 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 OR4S1Q8NGB4 309 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 NUDCD2Q8WVJ2 157 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 FOXC2Q99958 501 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 OCSTAMPQ9BR26 566 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 ZNF286AQ9HBT8 521 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 PALMDQ9NP74 551 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 CTSZQ9UBR2 303 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 METRNQ9UJH8 293 aa12.07□□□□□ -0.48
SHMT2-210ENST00000553950 UNC79Q9P2D8 2635 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 TRGV10A0A0A0MS01 117 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 hADV38S2A0JD32 116 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 ODAMA1E959 279 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 DVL1O14640 695 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 IGHV2-5P01817 119 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 AMY2BP19961 511 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 FAUP35544 74 aaKnown RBP12.06□□□□□ -0.48
SHMT2-210ENST00000553950 TAS2R46P59540 309 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 EDDM3AQ14507 147 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 TMEM30BQ3MIR4 351 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 Q6ZS49 121 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 DTX3Q8N9I9 347 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 DMRTB1Q96MA1 342 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 SSBP3Q9BWW4 388 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-210ENST00000553950 SHARPINQ9H0F6 387 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 KCNIP1Q9NZI2 227 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 ZNF581Q9P0T4 197 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 MTFP1Q9UDX5 166 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 OPN4Q9UHM6 478 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 TRAPPC2LQ9UL33 140 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 ANAPC10Q9UM13 185 aa12.06□□□□□ -0.48
SHMT2-210ENST00000553950 MEIKINA0A087WXM9 373 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 A8MXK9 166 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 DIRAS3O95661 229 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 WNT2P09544 360 aa12.05□□□□□ -0.48
SHMT2-210ENST00000553950 TAS2R19P59542 299 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms