RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 SSR4P51571 173 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 Q0VFX4 171 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 EXT1Q16394 746 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 HAGHQ16775 308 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 RPS19BP1Q86WX3 136 aaKnown RBP10.62□□□□□ -0.71
SHMT2-207ENST00000553837 RNASEH2CQ8TDP1 164 aaKnown RBP10.62□□□□□ -0.71
SHMT2-207ENST00000553837 ABHD5Q8WTS1 349 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 SNHG12Q9BXW3 62 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 ACTR3CQ9C0K3 210 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-207ENST00000553837 SH3BGRL3Q9H299 93 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 A0A1B0GV50 99 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 TRDCB7Z8K6 153 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 K7N7A8 449 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 TNFSF11O14788 317 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 CIDEAO60543 219 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 CDC14BO60729 498 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 IGLV3-1P01715 115 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 DBHP09172 617 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 GABRR1P24046 479 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 SNU13P55769 128 aaKnown RBP10.62□□□□□ -0.71
SHMT2-207ENST00000553837 DSCR4P56555 118 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-207ENST00000553837 MLF1P58340 268 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 TRIM61Q5EBN2 209 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 C10orf128Q5T292 105 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 PLXDC2Q6UX71 529 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 GALNTL5Q7Z4T8 443 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 OR8G5Q8NG78 346 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 NPRL2Q8WTW4 380 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 FRZBQ92765 325 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 FAM122AQ96E09 287 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 HIST1H2BLQ99880 126 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 PARD6AQ9NPB6 346 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 PITPNC1Q9UKF7 332 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 A0A1W2PPQ1 181 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 B4DEV8 164 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 F5H5K5 113 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 MBPP02686 304 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-207ENST00000553837 RPLP1P05386 114 aaKnown RBP10.61□□□□□ -0.71
SHMT2-207ENST00000553837 SRP19P09132 144 aaKnown RBP10.61□□□□□ -0.71
SHMT2-207ENST00000553837 NPSP0C0P6 89 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 OR5H8P0DN80 308 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 MSR1P21757 451 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 CTSSP25774 331 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 CHRFAM7AQ494W8 412 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 TMEM182Q6ZP80 229 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-207ENST00000553837 DOK3Q7L591 496 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 SLC35E3Q7Z769 313 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 SULF2Q8IWU5 870 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 OR5D18Q8NGL1 313 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 NEK7Q8TDX7 302 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 ARHGAP5-AS1Q96IT6 56 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 FAM210BQ96KR6 192 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 NIPSNAP3BQ9BS92 247 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 URM1Q9BTM9 101 aaKnown RBP10.61□□□□□ -0.71
SHMT2-207ENST00000553837 TMEM59Q9BXS4 323 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 OR14J1Q9UGF5 321 aa10.61□□□□□ -0.71
SHMT2-207ENST00000553837 COL27A1Q8IZC6 1860 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-207ENST00000553837 NSG1A0A0A6YYJ2 146 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 FKBP2P26885 142 aaKnown RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 ZNF133P52736 654 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 B3GALT5-AS1P59052 145 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 RND3P61587 244 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 GRB2P62993 217 aaKnown RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 LPAL2Q16609 132 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 FOXL2NBQ6ZUU3 175 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 ZNF664Q8N3J9 261 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 OR10A7Q8NGE5 316 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 MRPL24Q96A35 216 aaKnown RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 PGAM5Q96HS1 289 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 RCC1LQ96I51 464 aaKnown RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 RBM24Q9BX46 236 aaKnown RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 FOXD3Q9UJU5 478 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 DKKL1Q9UK85 242 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 KIAA1549Q9HCM3 1950 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 H0YL77 283 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 TLX3O43711 291 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 CBR3O75828 277 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 CTSDP07339 412 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 CEBPGP53567 150 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 SOX8P57073 446 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 HIST1H3AP68431 136 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 TRA2AQ13595 282 aaKnown RBP eCLIP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 PPP1R32Q7Z5V6 425 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 YRDCQ86U90 279 aaKnown RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 C1orf87Q8N0U7 546 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 CPEB3Q8NE35 698 aaKnown RBP10.6□□□□□ -0.71
SHMT2-207ENST00000553837 KIAA1456Q9P272 454 aa10.6□□□□□ -0.71
SHMT2-207ENST00000553837 MYO7BQ6PIF6 2116 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 MED19A0JLT2 244 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-207ENST00000553837 CRYM-AS1A6NIL9 109 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 HSBP1L1C9JCN9 74 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 NPIPA2E9PIF3 369 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 NPIPA3F8WFD2 350 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 DHHO43323 396 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 LAMTOR5O43504 91 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 HSPB1P04792 205 aaKnown RBP10.59□□□□□ -0.71
SHMT2-207ENST00000553837 RFPL3SP0C7P2 107 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 GZMBP10144 247 aa10.59□□□□□ -0.71
SHMT2-207ENST00000553837 FAHP16930 419 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms