RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ASH1LQ9NR48 2969 aaKnown RBP1.53□□□□□ -2.16
VRK1-202ENST00000553683 C1orf109Q9NX04 203 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 GLS2Q9UI32 602 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 DKKL1Q9UK85 242 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 ADAMTS7Q9UKP4 1686 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 FLVCR2Q9UPI3 526 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 SLC7A11Q9UPY5 501 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 ARL5AQ9Y689 179 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 MTCH2Q9Y6C9 303 aa1.53□□□□□ -2.16
VRK1-202ENST00000553683 CENPFP49454 3210 aa1.53□□□□□ -2.17
VRK1-202ENST00000553683 RANBP2P49792 3224 aaKnown RBP1.53□□□□□ -2.17
VRK1-202ENST00000553683 FBN1P35555 2871 aaKnown RBP1.53□□□□□ -2.17
VRK1-202ENST00000553683 SHANK1Q9Y566 2161 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 DLC1Q96QB1 1528 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 VPS8Q8N3P4 1428 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 RRBP1Q9P2E9 1410 aaKnown RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 ANKRD36BQ8N2N9 1353 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 GCN1Q92616 2671 aaKnown RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 ZNF532Q9HCE3 1301 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 A0A0G2JMP0 313 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 A0A0X1KG70 313 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 KBTBD11-OT1A0A1B0GTJ5 212 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 LINC00862A6NCI5 91 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 EVPLLA8MZ36 301 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 LEUTXA8MZ59 168 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 HACD1B0YJ81 288 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 H0Y980 276 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 C15orf65H3BRN8 121 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 M0QZ92 97 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 M0R036 132 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 CDC7O00311 574 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 CDIPTO14735 213 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 PHYHO14832 338 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 SLC16A4O15374 487 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 SOCS1O15524 211 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 RGS5O15539 181 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 FGF16O43320 207 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 PSTPIP1O43586 416 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 BANF1O75531 89 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 OR2J2O76002 312 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 PSMG1O95456 288 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TDP2O95551 362 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TMEM50AO95807 157 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 IGF2P01344 180 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 IGKV1D-16P01601 117 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 KLK1P06870 262 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 CT62P0C5K7 136 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 OCM2P0CE71 109 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 CD37P11049 281 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 ZNF35P13682 527 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 ATP1B2P14415 290 aaPredicted RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 GABRA1P14867 456 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 ZNF43P17038 809 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 GABRR2P28476 465 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 ADORA1P30542 326 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 GNRHRP30968 328 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 FOXN2P32314 431 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 PCK1P35558 622 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 AKR1C3P42330 323 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 RPL35P42766 123 aaKnown RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 CRYBB2P43320 205 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 MAGEA12P43365 314 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 LGALS7P47929 136 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 RBP2P50120 134 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 XKP51811 444 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 ACLYP53396 1101 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 OR4D2P58180 307 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 VSX2P58304 361 aaPredicted RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 ZNF616Q08AN1 781 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 RAB31Q13636 194 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TPBGQ13641 420 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TRAM1Q15629 374 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 PSMD5Q16401 504 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 CEACAM21Q3KPI0 293 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 VPS26BQ4G0F5 336 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 RNASE10Q5GAN6 216 aaKnown RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 MED27Q6P2C8 311 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 FAHD1Q6P587 224 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 HAGHLQ6PII5 290 aaPredicted RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 CEMP1Q6PRD7 247 aaPredicted RBP1.52□□□□□ -2.17
VRK1-202ENST00000553683 DRAM2Q6UX65 266 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TMPRSS11AQ6ZMR5 421 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 Q6ZSR3 168 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 LINC00336Q6ZUF6 198 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 AHSA2Q719I0 299 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TMED4Q7Z7H5 227 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 APRG1Q8IVJ8 170 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 C4orf33Q8N1A6 199 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TMEM161BQ8NDZ6 487 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 ZNF738Q8NE65 137 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 LFNGQ8NES3 379 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 SDR9C7Q8NEX9 313 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 OR4K2Q8NGD2 314 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 OR2Y1Q8NGV0 311 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 OR10K1Q8NGX5 313 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 OR6K3Q8NGY3 331 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 OR10J6PQ8NGY7 276 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 LINC01560Q8TB33 94 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 PIH1D2Q8WWB5 315 aa1.52□□□□□ -2.17
VRK1-202ENST00000553683 TMEM234Q8WY98 164 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms