RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 H3F3AP84243 136 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 ECH1Q13011 328 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 PLPPR5Q32ZL2 321 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 RNF212Q495C1 297 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 TRMT12Q53H54 448 aaKnown RBP2.8□□□□□ -1.96
TDP1-207ENST00000553617 HENMT1Q5T8I9 393 aaKnown RBP2.8□□□□□ -1.96
TDP1-207ENST00000553617 TMEM215Q68D42 235 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 C12orf54Q6X4T0 127 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 ZNF620Q6ZNG0 422 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 HIST2H3AQ71DI3 136 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 LRRC28Q86X40 367 aaPredicted RBP2.8□□□□□ -1.96
TDP1-207ENST00000553617 IFT20Q8IY31 132 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 ZNF439Q8NDP4 499 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 OR52E4Q8NGH9 312 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 OR4S2Q8NH73 311 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 OR9G1Q8NH87 305 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 MCFD2Q8NI22 146 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 SPPL2BQ8TCT7 592 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 RDH5Q92781 318 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 GHSRQ92847 366 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 IL22RA2Q969J5 263 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 PLEKHF1Q96S99 279 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 C20orf144Q9BQM9 153 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 TAPBPLQ9BX59 468 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 DEFB127Q9H1M4 99 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 PTGES2Q9H7Z7 377 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 NIT2Q9NQR4 276 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 AIG1Q9NVV5 245 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 COMMD9Q9P000 198 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 XCL2Q9UBD3 114 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 GNG8Q9UK08 70 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 CES1P1Q9UKY3 287 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 PSG8Q9UQ74 426 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 NEUROG3Q9Y4Z2 214 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 RBM7Q9Y580 266 aaKnown RBP2.8□□□□□ -1.96
TDP1-207ENST00000553617 OR51B2Q9Y5P1 312 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 MYH10P35580 1976 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 FAM135BQ49AJ0 1406 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 IBTKQ9P2D0 1353 aaPredicted RBP2.79□□□□□ -1.96
TDP1-207ENST00000553617 FAM240AA0A1B0GVK7 77 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 OR4C46A6NHA9 309 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 EPOPA6NHQ4 379 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 SMKR1H3BMG3 65 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 GABRPO00591 440 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 RGS5O15539 181 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CHST10O43529 356 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 FAM107AO95990 144 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CGAP01215 116 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 ARG1P05089 322 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 SULT1A3P0DMM9 295 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 SULT1A4P0DMN0 295 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CT45A6P0DMU7 189 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CT45A5P0DMU8 189 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CT45A7P0DMV0 189 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CYBAP13498 195 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CD99P14209 185 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 PSMB1P20618 241 aaKnown RBP2.79□□□□□ -1.96
TDP1-207ENST00000553617 CD34P28906 385 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 GPR6P46095 362 aaPredicted RBP2.79□□□□□ -1.96
TDP1-207ENST00000553617 UBE2E1P51965 193 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 KLF3P57682 345 aaPredicted RBP2.79□□□□□ -1.96
TDP1-207ENST00000553617 RAB38P57729 211 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 PFN3P60673 137 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 RPS20P60866 119 aaKnown RBP2.79□□□□□ -1.96
TDP1-207ENST00000553617 IFITM2Q01629 132 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 EMX2Q04743 252 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 SMAGPQ0VAQ4 97 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CLINT1Q14677 625 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CDK10Q15131 360 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 QPRTQ15274 297 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 KCNJ8Q15842 424 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CLEC12BQ2HXU8 276 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 LRRC26Q2I0M4 334 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CT45A1Q5HYN5 189 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 C9orf129Q5T035 196 aaKnown RBP2.79□□□□□ -1.96
TDP1-207ENST00000553617 TPTE2P1Q5T6R2 138 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 TMEM78Q5T7P6 136 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 OR10K2Q6IF99 312 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 XKRXQ6PP77 449 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 OPN5Q6U736 354 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 PLET1Q6UQ28 207 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 DOLPP1Q86YN1 238 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CBLN2Q8IUK8 224 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CEND1Q8N111 149 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 ZNF567Q8N184 647 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 MUC15Q8N387 334 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 ARRDC1Q8N5I2 433 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 OR5AR1Q8NGP9 310 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 OR1L8Q8NGR8 309 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 CT45A3Q8NHU0 189 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 PIFOQ8TCI5 191 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 ASB13Q8WXK3 278 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 TMEM54Q969K7 222 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 LRRC58Q96CX6 371 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 PGLYRP3Q96LB9 341 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 UBE2E2Q96LR5 201 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 GPR21Q99679 349 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 RARRES2Q99969 163 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 MARVELD1Q9BSK0 173 aa2.79□□□□□ -1.96
TDP1-207ENST00000553617 C1orf50Q9BV19 199 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms