RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 ZDHHC23Q8IYP9 409 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 DND1Q8IYX4 353 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 H1FOOQ8IZA3 346 aaPredicted RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 C17orf78Q8N4C9 275 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 OR2M7Q8NG81 312 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 OR51G2Q8NGK0 314 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 RFESDQ8TAC1 157 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 ASB13Q8WXK3 278 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 RERGQ96A58 199 aaPredicted RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 OR2V2Q96R30 315 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 DERL1Q9BUN8 251 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 DCAF13Q9NV06 445 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 OCIAD1Q9NX40 245 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 SLC25A37Q9NYZ2 338 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 SLC22A13Q9Y226 551 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 LAMTOR2Q9Y2Q5 125 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 FLVCR1Q9Y5Y0 555 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 DSPPQ9NZW4 1301 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 A0A1W2PRS3 328 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 ODAMA1E959 279 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 ZNF850A8MQ14 1090 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 H0YL77 283 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 SYT7O43581 403 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 DUX1O43812 170 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 NDUFB8O95169 186 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 SLC25A14O95258 325 aaPredicted RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 CA1P00915 261 aaPredicted RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 TTRP02766 147 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 IMPA1P29218 277 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 CCKARP32238 428 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 DCTDP32321 178 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 GDF5P43026 501 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 PIGPP57054 158 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 HIST1H3AP68431 136 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 MRPS21P82921 87 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 HGFACQ04756 655 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 ENDOGQ14249 297 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 ENTPD8Q5MY95 495 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 LY6G5CQ5SRR4 150 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 C9orf135Q5VTT2 229 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 Q6ZRG5 221 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 GRASPQ7Z6J2 395 aaPredicted RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 MRPL55Q7Z7F7 128 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 EID2Q8N6I1 236 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 OR9A4Q8NGU2 314 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 OR5K2Q8NHB8 316 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 NT5CQ8TCD5 201 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 RAB8BQ92930 207 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 C10orf35Q96D05 121 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 GRAMD2BQ96HH9 432 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 PYURFQ96I23 114 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 AP1S3Q96PC3 154 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 DUX5Q96PT3 197 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 PARP12Q9H0J9 701 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 WDR13Q9H1Z4 485 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 PRSS16Q9NQE7 514 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 THSD1Q9NS62 852 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 NDUFB11Q9NX14 153 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 GNG12Q9UBI6 72 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 MRM2Q9UI43 246 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 SH2B3Q9UQQ2 575 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 AMDHD2Q9Y303 409 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 TIMM10BQ9Y5J6 103 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 ARID1AO14497 2285 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 IGHV2OR16-5A0A0B4J2B6 119 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 KIR2DL5BA0A0G2JN68 375 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 KIR2DL5BA0A0G2JPC4 375 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 OTOL1A6NHN0 477 aaPredicted RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 IDSB3KWA1 339 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 GABRPO00591 440 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 FGF17O60258 216 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 ZNF217O75362 1048 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 STK16O75716 305 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 EIF4EP06730 217 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 GLI4P10075 376 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 EPCAMP16422 314 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 PPIBP23284 216 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 CRYBA2P53672 197 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 CLDN12P56749 244 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 RPL38P63173 70 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 PAFAH1B2P68402 229 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 HBA1P69905 142 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 TMEM267Q0VDI3 215 aaPredicted RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 MLLT11Q13015 90 aaPredicted RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 OR4C11Q6IEV9 310 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 FAHD1Q6P587 224 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 ZNF788Q6ZQV5 615 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 RBPMS2Q6ZRY4 209 aaKnown RBP3.5□□□□□ -1.85
RDH11-204ENST00000553578 KIR2DL5AQ8N109 375 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 IQCF1Q8N6M8 205 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 FADS6Q8N9I5 356 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 SUMF2Q8NBJ7 301 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 DNAJA3Q96EY1 480 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 SEC22AQ96IW7 307 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 ATP5SQ99766 215 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 CDCA4Q9BXL8 241 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 GPR35Q9HC97 309 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 CUTCQ9NTM9 273 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 OR5AC2Q9NZP5 309 aa3.5□□□□□ -1.85
RDH11-204ENST00000553578 P2RX2Q9UBL9 471 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms