RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 IGLV2-18A0A075B6J9 118 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 ZNF98A6NK75 572 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 C16orf90A8MZG2 172 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 C8orf87E5RJ46 101 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 FTCDNL1E5RQL4 147 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 F5H5K5 113 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 KLRC4-KLRK1H3BQV0 150 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 SLC31A1O15431 190 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 ATRNO75882 1429 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 NRASP01111 189 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 HRASP01112 189 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 KRASP01116 189 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 AKR1C4P17516 323 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 PVALBP20472 110 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-209ENST00000553280 CNTFRP26992 372 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 PYCR1P32322 319 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 EMP2P54851 167 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 FAM3AP98173 230 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 TMEM241Q24JQ0 296 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 NXNL2Q5VZ03 156 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 FAM45BPQ6NSW5 357 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 MUC15Q8N387 334 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 OR2K2Q8NGT1 345 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 SUN5Q8TC36 379 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 DTD1Q8TEA8 209 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 EBPLQ9BY08 206 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 ULBP1Q9BZM6 244 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 METTL17Q9H7H0 456 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-209ENST00000553280 COL27A1Q8IZC6 1860 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-209ENST00000553280 TMEM250H0YL14 139 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 LIN7AO14910 233 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-209ENST00000553280 CYTH3O43739 400 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 ADAP1O75689 374 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 EPPINO95925 133 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 PRB2P02812 416 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-209ENST00000553280 HLA-DMAP28067 261 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 ZNF83P51522 516 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 EIF4EBP2Q13542 120 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-209ENST00000553280 ZNF235Q14590 738 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 EXOC3L4Q17RC7 722 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 SDHAF4Q5VUM1 108 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 OLIG3Q7RTU3 272 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 DAZ4Q86SG3 579 aaKnown RBP2.88□□□□□ -1.95
SCFD1-209ENST00000553280 PLCZ1Q86YW0 608 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 ZFP62Q8NB50 900 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-209ENST00000553280 OR5L1Q8NGL2 311 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 DDI1Q8WTU0 396 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 DEDD2Q8WXF8 326 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 YIPF5Q969M3 257 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 ARL5BQ96KC2 179 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 GPR22Q99680 433 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 SLC19A3Q9BZV2 496 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 FBXL15Q9H469 300 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 PARVGQ9HBI0 331 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 DAZ1Q9NQZ3 744 aaKnown RBP2.88□□□□□ -1.95
SCFD1-209ENST00000553280 INIPQ9NRY2 104 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 NKIRAS1Q9NYS0 192 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 POMPQ9Y244 141 aa2.88□□□□□ -1.95
SCFD1-209ENST00000553280 TBL2Q9Y4P3 447 aaKnown RBP2.88□□□□□ -1.95
SCFD1-209ENST00000553280 A0A0A6YYH2 397 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 GOLGA6L4A6NEF3 574 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 A6NJ64 397 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 K7EM74 188 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 ISLRO14498 428 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 PSIP1O75475 530 aaKnown RBP2.87□□□□□ -1.95
SCFD1-209ENST00000553280 KCNK2O95069 426 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 HLA-AP01891 365 aaKnown RBP2.87□□□□□ -1.95
SCFD1-209ENST00000553280 IGLV7-43P04211 117 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 PTHLHP12272 177 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 GTF2F2P13984 249 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 ZNF3P17036 446 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 RCVRNP35243 200 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 RPL14P50914 215 aaKnown RBP2.87□□□□□ -1.95
SCFD1-209ENST00000553280 CASP12Q6UXS9 341 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 DPPA2Q7Z7J5 298 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 MARCH3Q86UD3 253 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 SLC13A5Q86YT5 568 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-209ENST00000553280 OR4P4Q8NGL7 312 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 OR8S1Q8NH09 359 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 CLDN23Q96B33 292 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 PRSS27Q9BQR3 290 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 RSPO3Q9BXY4 272 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-209ENST00000553280 DMAC2Q9NW81 257 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 PRO0461Q9UI25 63 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 NOTCH2Q04721 2471 aa2.87□□□□□ -1.95
SCFD1-209ENST00000553280 POLR3AO14802 1390 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-209ENST00000553280 SCN1AP35498 2009 aa2.86□□□□□ -1.95
SCFD1-209ENST00000553280 PTPRKQ15262 1439 aa2.86□□□□□ -1.95
SCFD1-209ENST00000553280 IGLL5B9A064 214 aa2.86□□□□□ -1.95
SCFD1-209ENST00000553280 F8A1P23610 371 aa2.86□□□□□ -1.95
SCFD1-209ENST00000553280 PSMD7P51665 324 aa2.86□□□□□ -1.95
SCFD1-209ENST00000553280 PAFAH1B3Q15102 231 aaKnown RBP2.86□□□□□ -1.95
SCFD1-209ENST00000553280 DNLZQ5SXM8 178 aa2.86□□□□□ -1.95
SCFD1-209ENST00000553280 KPRPQ5T749 579 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-209ENST00000553280 FAM131AQ6UXB0 335 aa2.86□□□□□ -1.95
SCFD1-209ENST00000553280 BLIDQ8IZY5 108 aa2.86□□□□□ -1.95
SCFD1-209ENST00000553280 C2orf15Q8WU43 125 aaKnown RBP2.86□□□□□ -1.95
SCFD1-209ENST00000553280 NAGKQ9UJ70 344 aa2.86□□□□□ -1.95
SCFD1-209ENST00000553280 PCM1Q15154 2024 aa2.85□□□□□ -1.95
SCFD1-209ENST00000553280 KIAA1671Q9BY89 1806 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms