RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 KCNIP1Q9NZI2 227 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 RAB22AQ9UL26 194 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 TBL2Q9Y4P3 447 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 POMT1Q9Y6A1 747 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 NF1P21359 2839 aa8.46□□□□□ -1.06
TRAFD1-208ENST00000552890 ZFHX3Q15911 3703 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 IFITM5A6NNB3 132 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 C17orf98A8MV24 154 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 F8VVB4 439 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 F8VWA3 439 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 CLDN34H7C241 214 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 AIPO00170 330 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 SPINT2O43291 252 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 PDCD6O75340 191 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 HOXB4P17483 251 aaPredicted RBP8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 RAB6AP20340 208 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 DUSP1P28562 367 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 CEACAM3P40198 252 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 OR3A1P47881 315 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 PRRX1P54821 245 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 EDDM3AQ14507 147 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 P2RY14Q15391 338 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 SSX1Q16384 188 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 Q3ZCU0 254 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 LYPD6Q86Y78 171 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 OR5R1Q8NH85 324 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 ZNF596Q8TC21 504 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 SSMEM1Q8WWF3 244 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 TNFRSF14Q92956 283 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 SLC25A28Q96A46 364 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 FAM3DQ96BQ1 224 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 Q96M66 194 aa8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 MRPS26Q9BYN8 205 aaKnown RBP8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 TXNL4BQ9NX01 149 aaKnown RBP8.45□□□□□ -1.06
TRAFD1-208ENST00000552890 ATRQ13535 2644 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 MEIKINA0A087WXM9 373 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 TRAV40A0A0B4J280 105 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 CENPVL3A0A0U1RRI6 287 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 TMEM82A0PJX8 343 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 TRIM64CA6NLI5 447 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 GEMIN2O14893 280 aaKnown RBP8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 ORC5O43913 435 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 PSPNO60542 156 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 CLPXO76031 633 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 MPIG6BO95866 241 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 LPLP06858 475 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 SNU13P55769 128 aaKnown RBP8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 HILS1P60008 231 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 RPS27AP62979 156 aaKnown RBP8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 PIGYQ3MUY2 71 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 MINOS1Q5TGZ0 78 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 C22orf42Q6IC83 251 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 CCDC144NLQ6NUI1 221 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 CRIP3Q6Q6R5 217 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 MOB1BQ7L9L4 216 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 SUMF2Q8NBJ7 301 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 OR4S1Q8NGB4 309 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 OR52M1Q8NGK5 317 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 LHX4Q969G2 390 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 TM2D1Q9BX74 207 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 CHST6Q9GZX3 395 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 PPA2Q9H2U2 334 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 PRDM13Q9H4Q3 707 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 LINC00574Q9H8X3 128 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 RAB18Q9NP72 206 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 C19orf12Q9NSK7 152 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 PLEKHJ1Q9NW61 149 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 ETAA1Q9NY74 926 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 RCC2Q9P258 522 aaKnown RBP8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 HSF4Q9ULV5 492 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 AMMECR1Q9Y4X0 333 aaPredicted RBP8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 PEX16Q9Y5Y5 336 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 SESN1Q9Y6P5 492 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 MINOS1-NBL1R4GNA1 71 aa8.44□□□□□ -1.06
TRAFD1-208ENST00000552890 A0A0A6YYH2 397 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 TRAV24A0A0B4J272 114 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 LOC100506127A0A0U1RQW1 187 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 KBTBD11-OT1A0A1B0GTJ5 212 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 A6NJ64 397 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 TMEM14DPA8MWL7 114 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 OOSP1A8MZH6 123 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 TOR1AO14656 332 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 NPFFO15130 113 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 AIREO43918 545 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 RGS11O94810 467 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 IGHV1-8P0DP01 117 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 VSIG8P0DPA2 414 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 CALCBP10092 127 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 SELLP14151 372 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 GLP1RP43220 463 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 CEBPDP49716 269 aaPredicted RBP8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 AESQ08117 197 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 TAF9Q16594 264 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 FAM27D1Q5T7N8 215 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 STEAP3Q658P3 488 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 LIAT1Q6ZQX7 453 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 C1orf229Q6ZS94 237 aaPredicted RBP8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 BATF2Q8N1L9 274 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 OR11H6Q8NGC7 330 aa8.43□□□□□ -1.06
TRAFD1-208ENST00000552890 OR4M1Q8NGD0 313 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms