RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 TMED9Q9BVK6 235 aa13.54□□□□□ -0.24
BRF1-219ENST00000551787 CDCA4Q9BXL8 241 aa13.54□□□□□ -0.24
BRF1-219ENST00000551787 TMEM133Q9H2Q1 129 aa13.54□□□□□ -0.24
BRF1-219ENST00000551787 KIF25Q9UIL4 384 aa13.54□□□□□ -0.24
BRF1-219ENST00000551787 HILPDAQ9Y5L2 63 aa13.54□□□□□ -0.24
BRF1-219ENST00000551787 MMP24Q9Y5R2 645 aa13.54□□□□□ -0.24
BRF1-219ENST00000551787 DSCAML1Q8TD84 2053 aa13.54□□□□□ -0.24
BRF1-219ENST00000551787 MEIKINA0A087WXM9 373 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 IGHV2-26A0A0B4J1V2 119 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 GEMIN2O14893 280 aaKnown RBP13.53□□□□□ -0.24
BRF1-219ENST00000551787 OR7C1O76099 320 aaPredicted RBP13.53□□□□□ -0.24
BRF1-219ENST00000551787 IL13RA2Q14627 380 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 SPHARQ15513 63 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 UTF1Q5T230 341 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 FAM27D1Q5T7N8 215 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 RNLSQ5VYX0 342 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 SLC35E4Q6ICL7 350 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 OSR2Q8N2R0 312 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 CORO2AQ92828 525 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 CNBD2Q96M20 576 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 ANKRD60Q9BZ19 345 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 VCX3BQ9H321 246 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 GAL3ST2Q9H3Q3 398 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 DUSP21Q9H596 190 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 LSM2Q9Y333 95 aaKnown RBP13.53□□□□□ -0.24
BRF1-219ENST00000551787 TPRKBQ9Y3C4 175 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 RNF114Q9Y508 228 aa13.53□□□□□ -0.24
BRF1-219ENST00000551787 A0A1B0GUS0 222 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 CSN2P05814 226 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 CD1AP06126 327 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 FSTP19883 344 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 RBM11P57052 281 aaKnown RBP13.52□□□□□ -0.25
BRF1-219ENST00000551787 RPL15P61313 204 aaKnown RBP13.52□□□□□ -0.25
BRF1-219ENST00000551787 IRF3Q14653 427 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 C17orf58Q2M2W7 97 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 ACSM3Q53FZ2 586 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 GLIPR1L1Q6UWM5 242 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 HEPN1Q6WQI6 88 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 ABHD12Q8N2K0 398 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 SUMF2Q8NBJ7 301 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 PLPPR1Q8TBJ4 325 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 TMEM203Q969S6 136 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 MALSU1Q96EH3 234 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 DPCDQ9BVM2 203 aaPredicted RBP13.52□□□□□ -0.25
BRF1-219ENST00000551787 CLEC7AQ9BXN2 247 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 BARHL1Q9BZE3 327 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 CCDC90BQ9GZT6 254 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 FOXJ3Q9UPW0 622 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 MRPS28Q9Y2Q9 187 aaKnown RBP13.52□□□□□ -0.25
BRF1-219ENST00000551787 SIGLEC9Q9Y336 463 aa13.52□□□□□ -0.25
BRF1-219ENST00000551787 TBL2Q9Y4P3 447 aaKnown RBP13.52□□□□□ -0.25
BRF1-219ENST00000551787 RGS10O43665 173 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 ATP6V1G2O95670 118 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 HSMCR30P0CW71 290 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 NFYBP25208 207 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 GLP1RP43220 463 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 KRTAP10-3P60369 221 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 LTC4SQ16873 150 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 ATAD3CQ5T2N8 411 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 LIPKQ5VXJ0 399 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 AWAT2Q6E213 333 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 OR4D6Q8NGJ1 314 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 OR13A1Q8NGR1 328 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 SGMS2Q8NHU3 365 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 NDNFQ8TB73 568 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 WFDC12Q8WWY7 111 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 FOXRED1Q96CU9 486 aaPredicted RBP13.51□□□□□ -0.25
BRF1-219ENST00000551787 BANF2Q9H503 90 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 TAS2R3Q9NYW6 316 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 IL36GQ9NZH8 169 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 OR6C3Q9NZP0 311 aa13.51□□□□□ -0.25
BRF1-219ENST00000551787 TRRAPQ9Y4A5 3859 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 CHST1O43916 411 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 IGHV3-7P01780 117 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 GTF2F2P13984 249 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 CRHBPP24387 322 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 VHLP40337 213 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 MAP2K4P45985 399 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 GP2P55259 537 aaKnown RBP13.5□□□□□ -0.25
BRF1-219ENST00000551787 BDH1Q02338 343 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 AANATQ16613 207 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 RSBN1Q5VWQ0 802 aaPredicted RBP13.5□□□□□ -0.25
BRF1-219ENST00000551787 OR52W1Q6IF63 320 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 CEACAM19Q7Z692 300 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 TMEM219Q86XT9 240 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 ZNF565Q8N9K5 539 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 OR4P4Q8NGL7 312 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 RFESDQ8TAC1 157 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 MRGPRDQ8TDS7 321 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 ZNF286AQ9HBT8 521 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 ABCB10Q9NRK6 738 aa13.5□□□□□ -0.25
BRF1-219ENST00000551787 KBTBD11-OT1A0A1B0GTJ5 212 aa13.49□□□□□ -0.25
BRF1-219ENST00000551787 MEGF11A6BM72 1044 aa13.49□□□□□ -0.25
BRF1-219ENST00000551787 ZNF729A6NN14 1252 aaPredicted RBP13.49□□□□□ -0.25
BRF1-219ENST00000551787 ZNF780AO75290 641 aaPredicted RBP13.49□□□□□ -0.25
BRF1-219ENST00000551787 TSPAN9O75954 239 aa13.49□□□□□ -0.25
BRF1-219ENST00000551787 CGB3P0DN86 165 aa13.49□□□□□ -0.25
BRF1-219ENST00000551787 CGB7P0DN87 165 aa13.49□□□□□ -0.25
BRF1-219ENST00000551787 HTR1DP28221 377 aa13.49□□□□□ -0.25
BRF1-219ENST00000551787 NHLRC3Q5JS37 347 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms