RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 DBTP11182 482 aaKnown RBP10.18□□□□□ -0.78
PTCH1-221ENST00000550914 HOXD3P31249 432 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-221ENST00000550914 POLR2IP36954 125 aaKnown RBP10.18□□□□□ -0.78
PTCH1-221ENST00000550914 MYCNOSP40205 109 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 NANOS3P60323 173 aaKnown RBP10.18□□□□□ -0.78
PTCH1-221ENST00000550914 SCN1BQ07699 218 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 CDK5R1Q15078 307 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 SLC25A30Q5SVS4 291 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 SLC16A12Q6ZSM3 486 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 OR2W3Q7Z3T1 314 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 OR8H3Q8N146 312 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 OR13C3Q8NGS6 347 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 OR13C9Q8NGT0 318 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 SPACA5Q96QH8 159 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 MYCBPQ99417 103 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-221ENST00000550914 ZNF649Q9BS31 505 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 ZCCHC4Q9H5U6 513 aa10.18□□□□□ -0.78
PTCH1-221ENST00000550914 A0A1W2PPI3 338 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 DAPL1A0PJW8 107 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 OR4C45A6NMZ5 311 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 SNRNP70P08621 437 aaKnown RBP10.17□□□□□ -0.78
PTCH1-221ENST00000550914 NFYBP25208 207 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 C21orf33P30042 268 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-221ENST00000550914 MTNR1BP49286 362 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 RAB7AP51149 207 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 GP2P55259 537 aaKnown RBP10.17□□□□□ -0.78
PTCH1-221ENST00000550914 SLC35B1P78383 322 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 BNIP1Q12981 228 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 MADCAM1Q13477 382 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 ATXN7L3Q14CW9 347 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-221ENST00000550914 ELP2Q6IA86 826 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 UNQ9370/PRO34162Q6UXP9 181 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 AMIGO2Q86SJ2 522 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 C5orf56Q8N8D9 126 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 OR10A7Q8NGE5 316 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 OR51A4Q8NGJ6 313 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 OR5D18Q8NGL1 313 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 OR10AC1Q8NH08 325 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 OR56B4Q8NH76 319 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 HAVCR2Q8TDQ0 301 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 MRPL48Q96GC5 212 aaKnown RBP10.17□□□□□ -0.78
PTCH1-221ENST00000550914 CENPNQ96H22 339 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-221ENST00000550914 HRASLS5Q96KN8 279 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 P2RX4Q99571 388 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 PPIL3Q9H2H8 161 aaKnown RBP10.17□□□□□ -0.78
PTCH1-221ENST00000550914 RIBC2Q9H4K1 309 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 IMPAD1Q9NX62 359 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 CALYQ9NYX4 217 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 MYRFQ9Y2G1 1151 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 SORL1Q92673 2214 aa10.17□□□□□ -0.78
PTCH1-221ENST00000550914 IL1AP01583 271 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 IGHG2P01859 326 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 TMEM225BP0DP42 221 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 TMEM11P17152 192 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 GLP1RP43220 463 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 KCNJ3P48549 501 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 ZP1P60852 638 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 SNRPGP62308 76 aaKnown RBP10.16□□□□□ -0.78
PTCH1-221ENST00000550914 ALKBH1Q13686 389 aaKnown RBP10.16□□□□□ -0.78
PTCH1-221ENST00000550914 KISS1Q15726 138 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 LCE2DQ5TA82 110 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-221ENST00000550914 MEDAGQ5VYS4 303 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 RNF144BQ7Z419 303 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 ZNF329Q86UD4 541 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 PARP16Q8N5Y8 322 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 DRAM1Q8N682 238 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 ACBD7Q8N6N7 88 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 PXT1Q8NFP0 134 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 OR5D14Q8NGL3 314 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 RNFT2Q96EX2 444 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 PELI1Q96FA3 418 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 CPNE2Q96FN4 548 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-221ENST00000550914 BARHL1Q9BZE3 327 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 IDI2-AS1Q9NZ38 188 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 OAZ3Q9UMX2 235 aa10.16□□□□□ -0.78
PTCH1-221ENST00000550914 MEIKINA0A087WXM9 373 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 SNTNA6NMZ2 147 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 SERPINE3A8MV23 424 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 NPIPB11E5RHQ5 1161 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 H0YHG0 523 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 H0YJX3 145 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 SULT1B1O43704 296 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 HCKP08631 526 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 NHLRC4P0CG21 123 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-221ENST00000550914 EBI3Q14213 229 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 HES1Q14469 280 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 IL13RA2Q14627 380 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 PAN3Q58A45 887 aaKnown RBP10.15□□□□□ -0.78
PTCH1-221ENST00000550914 UTF1Q5T230 341 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 C8orf86Q6ZUL3 223 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 SERPINA12Q8IW75 414 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 FOXRED2Q8IWF2 684 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 KLHL30-AS1Q8NEE0 82 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 Q8NFD4 153 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 OR13A1Q8NGR1 328 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 CNIH3Q8TBE1 160 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 NOL4LQ96MY1 436 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-221ENST00000550914 ING3Q9NXR8 418 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 KIF25Q9UIL4 384 aa10.15□□□□□ -0.78
PTCH1-221ENST00000550914 PSG11Q9UQ72 335 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms