RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 PBOV1Q9GZY1 135 aa3.91□□□□□ -1.78
SCAF11-214ENST00000550893 MMADHCQ9H3L0 296 aaPredicted RBP3.91□□□□□ -1.78
SCAF11-214ENST00000550893 OPA3Q9H6K4 179 aa3.91□□□□□ -1.78
SCAF11-214ENST00000550893 KRT84Q9NSB2 600 aa3.91□□□□□ -1.78
SCAF11-214ENST00000550893 C19orf12Q9NSK7 152 aa3.91□□□□□ -1.78
SCAF11-214ENST00000550893 CLN6Q9NWW5 311 aa3.91□□□□□ -1.78
SCAF11-214ENST00000550893 RPUSD1Q9UJJ7 312 aaKnown RBP3.91□□□□□ -1.78
SCAF11-214ENST00000550893 NUP50Q9UKX7 468 aa3.91□□□□□ -1.78
SCAF11-214ENST00000550893 OR2W1Q9Y3N9 320 aa3.91□□□□□ -1.78
SCAF11-214ENST00000550893 AP4S1Q9Y587 144 aa3.91□□□□□ -1.78
SCAF11-214ENST00000550893 AUP1Q9Y679 476 aa3.91□□□□□ -1.78
SCAF11-214ENST00000550893 R4GMQ9 66 aa3.91□□□□□ -1.78
SCAF11-214ENST00000550893 CSMD3Q7Z407 3707 aa3.9□□□□□ -1.78
SCAF11-214ENST00000550893 A0A0U1RQK1 487 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 ZNF816-ZNF321PA0A0X1KG74 233 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 LOC107986453A0A1B0GWG9 222 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 GGT3PA6NGU5 568 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 OR4C45A6NMZ5 311 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 ZNF879B4DU55 563 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 G3V2T6 193 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 H3BSH0 61 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 VCYO14598 125 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 SIGLEC5O15389 551 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 ADAM20O43506 726 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 NOS1APO75052 506 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 ENTPD6O75354 484 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 E2F6O75461 281 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 MTRF1O75570 445 aaKnown RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 DHRS3O75911 302 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 IGHV4-59P01825 116 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 H2BFMP0C1H6 154 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 LIMS3P0CW19 117 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 LIMS4P0CW20 117 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 HNF1AP20823 631 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 MDKP21741 143 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 PRTN3P24158 256 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 FASP25445 335 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 HTR1FP30939 366 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 DDOSTP39656 456 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 GUCA1AP43080 201 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 SLC15A1P46059 708 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 GPM6AP51674 278 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 BLVRAP53004 296 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 SNRPGP62308 76 aaKnown RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 SLC3A1Q07837 685 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 SNAPC1Q16533 368 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 TP53I3Q53FA7 332 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 C1orf146Q5VVC0 180 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 LIPNQ5VXI9 398 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 DEGS2Q6QHC5 323 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 BAIAP2L2Q6UXY1 529 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 ACP7Q6ZNF0 438 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 BTN2A1Q7KYR7 527 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 LYPD6Q86Y78 171 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 RDH10Q8IZV5 341 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 CBR4Q8N4T8 237 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 CSNK2A3Q8NEV1 391 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 SLC24A4Q8NFF2 622 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 OR52H1Q8NGJ2 320 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 OR51G2Q8NGK0 314 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 OR10Z1Q8NGY1 313 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 THEM6Q8WUY1 208 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 SPRYD4Q8WW59 207 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 DNAJC9Q8WXX5 260 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 ORAI1Q96D31 301 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 LGALS12Q96DT0 336 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 PELI1Q96FA3 418 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 SDSLQ96GA7 329 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 GRAMD2BQ96HH9 432 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 PGAM5Q96HS1 289 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 FAM71F1Q96KD3 344 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 WDFY2Q96P53 400 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 TBX5Q99593 518 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 LYSTQ99698 3801 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 NKX3-1Q99801 234 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 DCTN5Q9BTE1 182 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 PAPOLGQ9BWT3 736 aaKnown RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 CHIAQ9BZP6 476 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 RGCCQ9H4X1 137 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 ISG20L2Q9H9L3 353 aaKnown RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 RNPEPL1Q9HAU8 725 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 GPR173Q9NS66 373 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 MTCH1Q9NZJ7 389 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 ZNRD1Q9P1U0 126 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 MIOXQ9UGB7 285 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 EXOGQ9Y2C4 368 aaKnown RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 N6AMT1Q9Y5N5 214 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 TET2Q6N021 2002 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-214ENST00000550893 RYR3Q15413 4870 aa3.9□□□□□ -1.79
SCAF11-214ENST00000550893 TENM3Q9P273 2699 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 SACSQ9NZJ4 4579 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 TMEM269A0A1B0GVZ9 245 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 MEX3AA1L020 520 aaKnown RBP3.89□□□□□ -1.79
SCAF11-214ENST00000550893 TMEM210A6NLX4 147 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 ODF3BA8MYP8 253 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 CHST1O43916 411 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 MMP23AO75900 390 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 CLIC3O95833 236 aa3.89□□□□□ -1.79
SCAF11-214ENST00000550893 AMBPP02760 352 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms