RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 Q6P435 159 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 MRPL30Q8TCC3 161 aaKnown RBP17.76■□□□□ 0.43
PRDM4-205ENST00000550376 SLC2A9Q9NRM0 540 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 CRYM-AS1A6NIL9 109 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 TEX46H3BTG2 121 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 J3QW42 95 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 OR2H2O95918 312 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 PPYP01298 95 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 PSMB6P28072 239 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 ZNF324BQ6AW86 544 aaPredicted RBP17.76■□□□□ 0.43
PRDM4-205ENST00000550376 SECTM1Q8WVN6 248 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 IL1F10Q8WWZ1 152 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 VRK1Q99986 396 aaPredicted RBP17.76■□□□□ 0.43
PRDM4-205ENST00000550376 RNF126Q9BV68 326 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 TNFSF18Q9UNG2 199 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 SSUH2Q9Y2M2 353 aa17.76■□□□□ 0.43
PRDM4-205ENST00000550376 RNF222A6NCQ9 220 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 RPA2P15927 270 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 GLP1RP43220 463 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 NAAAQ02083 359 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 FGL1Q08830 312 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 KRTCAP3Q53RY4 240 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 C11orf53Q8IXP5 236 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 MRPL24Q96A35 216 aaKnown RBP17.75■□□□□ 0.43
PRDM4-205ENST00000550376 MAB21L2Q9Y586 359 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 IGKV1D-13A0A0B4J2D9 117 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 K7ENP7 123 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 RP2O75695 350 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 SLC34A2O95436 690 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 IGKV1-13P0DP09 117 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 RBM39Q14498 530 aaKnown RBP17.75■□□□□ 0.43
PRDM4-205ENST00000550376 THAP6Q8TBB0 222 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 PLPPR1Q8TBJ4 325 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 NRIP2Q9BQI9 281 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 RAB18Q9NP72 206 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 OR5AC2Q9NZP5 309 aa17.75■□□□□ 0.43
PRDM4-205ENST00000550376 GCH1P30793 250 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 ERVK11-1P61568 191 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 HERV-K104P61576 105 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 PAN3Q58A45 887 aaKnown RBP17.74■□□□□ 0.43
PRDM4-205ENST00000550376 MOB3AQ96BX8 217 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 SNRNP40Q96DI7 357 aaKnown RBP17.74■□□□□ 0.43
PRDM4-205ENST00000550376 RRNAD1Q96FB5 475 aaKnown RBP17.74■□□□□ 0.43
PRDM4-205ENST00000550376 ASF1BQ9NVP2 202 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 RPS10-NUDT3A0A1W2PQS6 291 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 PGA5P0DJD9 388 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 TIMP3P35625 211 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 RAB32Q13637 225 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 ZNF718Q3SXZ3 478 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 SPRNQ5BIV9 151 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 SPIN3Q5JUX0 258 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 PLK3Q9H4B4 646 aa17.74■□□□□ 0.43
PRDM4-205ENST00000550376 GNRHRP30968 328 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 TDGF1P3P51864 188 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 DCUN1D4Q92564 292 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 BOD1Q96IK1 185 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 SYT3Q9BQG1 590 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 RAXQ9Y2V3 346 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 SLC33A1O00400 549 aaPredicted RBP17.73■□□□□ 0.43
PRDM4-205ENST00000550376 S100A10P60903 97 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 GFRALQ6UXV0 394 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 LYZL2Q7Z4W2 148 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 KIRREL1Q96J84 757 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 DMRTA2Q96SC8 542 aa17.73■□□□□ 0.43
PRDM4-205ENST00000550376 A0A0G2JNJ9 132 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 hCG_1807616A0A1W2PRN6 198 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 TRDCB7Z8K6 153 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 TNFSF12O43508 249 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 RLN2P04090 185 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 TK1P04183 234 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 CEACAM8P31997 349 aaPredicted RBP17.72■□□□□ 0.43
PRDM4-205ENST00000550376 PMELP40967 661 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 LDLRAD3Q86YD5 345 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 OR2Z1Q8NG97 314 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 ASB13Q8WXK3 278 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 BCL2L14Q9BZR8 327 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 NAA60Q9H7X0 242 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 Q9UFV3 132 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 POLDIP2Q9Y2S7 368 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 HSD17B6O14756 317 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 SLC25A4P12235 298 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 IAH1Q2TAA2 248 aaPredicted RBP17.72■□□□□ 0.43
PRDM4-205ENST00000550376 TMEM65Q6PI78 240 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 MEX3BQ6ZN04 569 aaKnown RBP17.72■□□□□ 0.43
PRDM4-205ENST00000550376 RELL2Q8NC24 303 aaPredicted RBP17.72■□□□□ 0.43
PRDM4-205ENST00000550376 TP53RKQ96S44 253 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 NMES1Q9C002 83 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 RASL12Q9NYN1 266 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 ATP23Q9Y6H3 246 aa17.72■□□□□ 0.43
PRDM4-205ENST00000550376 MSGN1A6NI15 193 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 A8MXE2 369 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 PSPNO60542 156 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 C4BPBP20851 252 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 GGNBP1Q5YKI7 109 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 FAM53AQ6NSI3 398 aaPredicted RBP17.71■□□□□ 0.43
PRDM4-205ENST00000550376 UNQ6126/PRO20091Q6UXV3 157 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 C1orf123Q9NWV4 160 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 OR1A1Q9P1Q5 309 aa17.71■□□□□ 0.43
PRDM4-205ENST00000550376 PHF1O43189 567 aaPredicted RBP17.71■□□□□ 0.43
PRDM4-205ENST00000550376 ECI1P42126 302 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms