RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SYT3Q9BQG1 590 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 MS4A7Q9GZW8 240 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-206ENST00000549505 CXXC4Q9H2H0 198 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 CYTL1Q9NRR1 136 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 ZNF629Q9UEG4 869 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-206ENST00000549505 IGHV2OR16-5A0A0B4J2B6 119 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 TAAR5O14804 337 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 PPYP01298 95 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 CECR9P0C854 216 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 NKX6-1P78426 367 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-206ENST00000549505 OR2T2Q6IF00 324 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 CXorf67Q86X51 503 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-206ENST00000549505 THAP6Q8TBB0 222 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 OR2J1Q9GZK6 312 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 SHARPINQ9H0F6 387 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 FAM212BQ9NTI7 297 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-206ENST00000549505 MEMO1Q9Y316 297 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 GPR179Q6PRD1 2367 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 MED12Q93074 2177 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 FXYD6-FXYD2A0A087WZ82 144 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 IGKV1-6A0A0C4DH72 117 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 MFSD2BA6NFX1 497 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 SLC33A1O00400 549 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-206ENST00000549505 FGF16O43320 207 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 M6PRP20645 277 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 GLP1RP43220 463 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 POLR2GP62487 172 aaKnown RBP eCLIP8.47□□□□□ -1.05
RAB5B-206ENST00000549505 ZNF610Q8N9Z0 462 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 BVESQ8NE79 360 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 OR10C1Q96KK4 312 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 CNTNAP3BQ96NU0 1288 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 ARV1Q9H2C2 271 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 BARX1Q9HBU1 254 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-206ENST00000549505 SLC2A9Q9NRM0 540 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 CACNA1GO43497 2377 aa8.47□□□□□ -1.05
RAB5B-206ENST00000549505 CA6P23280 308 aa8.46□□□□□ -1.05
RAB5B-206ENST00000549505 VAMP1P23763 118 aa8.46□□□□□ -1.05
RAB5B-206ENST00000549505 GNRHRP30968 328 aa8.46□□□□□ -1.05
RAB5B-206ENST00000549505 FCGR2CP31995 323 aa8.46□□□□□ -1.05
RAB5B-206ENST00000549505 HLA-DRB3P79483 266 aa8.46□□□□□ -1.05
RAB5B-206ENST00000549505 BAMBIQ13145 260 aa8.46□□□□□ -1.05
RAB5B-206ENST00000549505 HAGHLQ6PII5 290 aaPredicted RBP8.46□□□□□ -1.05
RAB5B-206ENST00000549505 ARL6Q9H0F7 186 aa8.46□□□□□ -1.05
RAB5B-206ENST00000549505 WDR13Q9H1Z4 485 aa8.46□□□□□ -1.05
RAB5B-206ENST00000549505 KCNIP3Q9Y2W7 256 aa8.46□□□□□ -1.05
RAB5B-206ENST00000549505 VPS13AQ96RL7 3174 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 IGLV3-9A0A075B6K5 115 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 MLNRO43193 412 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 DEDDO75618 318 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 LYZL6O75951 148 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 OR7C1O76099 320 aaPredicted RBP8.46□□□□□ -1.06
RAB5B-206ENST00000549505 KNG1P01042 644 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 CCNOP22674 350 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 AADACP22760 399 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 PRSS12P56730 875 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 ZNF154Q13106 437 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 HSD17B13Q7Z5P4 300 aaPredicted RBP8.46□□□□□ -1.06
RAB5B-206ENST00000549505 GLYATL2Q8WU03 294 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 MAFIPQ8WZ33 124 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 DYRK2Q92630 601 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 ADAT1Q9BUB4 502 aaKnown RBP8.46□□□□□ -1.06
RAB5B-206ENST00000549505 ZNF442Q9H7R0 627 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 ELOVL5Q9NYP7 299 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 TMED3Q9Y3Q3 217 aa8.46□□□□□ -1.06
RAB5B-206ENST00000549505 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.45□□□□□ -1.06
RAB5B-206ENST00000549505 K7ENP7 123 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 CDS2O95674 445 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 PLATP00750 562 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 IGHV3-13P01766 116 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 GAPDHP04406 335 aaKnown RBP8.45□□□□□ -1.06
RAB5B-206ENST00000549505 MMP9P14780 707 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 PGAM2P15259 253 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 UCP1P25874 307 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 GATA4P43694 442 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 PIGPP57054 158 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 SLC35E4Q6ICL7 350 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 ZNF474Q6S9Z5 364 aaPredicted RBP8.45□□□□□ -1.06
RAB5B-206ENST00000549505 OR4D5Q8NGN0 318 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 OR1J1Q8NGS3 322 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 SLC5A7Q9GZV3 580 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 TMEM222Q9H0R3 208 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 MBD2Q9UBB5 411 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 CACNA1CQ13936 2221 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 MED12LQ86YW9 2145 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 A8MXK9 166 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 CCSO14618 274 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 MPPED1O15442 326 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 RBMXP38159 391 aaKnown RBP8.45□□□□□ -1.06
RAB5B-206ENST00000549505 MPV17P39210 176 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 Q6ZR03 302 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 LGI3Q8N145 548 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 RTN4IP1Q8WWV3 396 aaPredicted RBP8.45□□□□□ -1.06
RAB5B-206ENST00000549505 AKR1E2Q96JD6 320 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 PDCD10Q9BUL8 212 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 COL25A1Q9BXS0 654 aaPredicted RBP8.45□□□□□ -1.06
RAB5B-206ENST00000549505 NUDT19A8MXV4 375 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 MKRN2OSH3BPM6 223 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 ADH4P08319 380 aa8.45□□□□□ -1.06
RAB5B-206ENST00000549505 IDH3GP51553 393 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms