RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CCL20P78556 96 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 PNLIPRP3Q17RR3 467 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 NSUN5P2Q63ZY6 315 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 CDPF1Q6NVV7 123 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 RPUSD3Q6P087 351 aaKnown RBP9.58□□□□□ -0.88
LINC00661-204ENST00000549354 LINC00696Q6ZRV3 163 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 SAT2Q96F10 170 aaPredicted RBP9.58□□□□□ -0.88
LINC00661-204ENST00000549354 HES7Q9BYE0 225 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 LRFN1Q9P244 771 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 AK3Q9UIJ7 227 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 FOXD3Q9UJU5 478 aaPredicted RBP9.58□□□□□ -0.88
LINC00661-204ENST00000549354 ST3GAL6Q9Y274 331 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 WNK2Q9Y3S1 2297 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 KIAA1549Q9HCM3 1950 aa9.58□□□□□ -0.88
LINC00661-204ENST00000549354 HLA-HP01893 362 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 FTH1P19P0C7X4 201 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 NTF4P34130 210 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 SULT1A1P50225 295 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 HGFACQ04756 655 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 SPINK14Q6IE38 97 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 OR14K1Q8NGZ2 314 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 FER1L6-AS2Q96M78 137 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 OCSTAMPQ9BR26 566 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 SRXN1Q9BYN0 137 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 C12orf49Q9H741 205 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 FAM212BQ9NTI7 297 aaPredicted RBP9.57□□□□□ -0.88
LINC00661-204ENST00000549354 PLA2G3Q9NZ20 509 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 PCNX2A6NKB5 2137 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 NCKAP5O14513 1909 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 PQLC2LA1A4F0 135 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 ZZEF1O43149 2961 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 DEDDO75618 318 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 JTBO76095 146 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 EIF5AP63241 154 aaKnown RBP9.57□□□□□ -0.88
LINC00661-204ENST00000549354 ABHD17BQ5VST6 288 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 DOK3Q7L591 496 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 LHFPL1Q86WI0 220 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 OR2M7Q8NG81 312 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 BOKQ9UMX3 212 aaPredicted RBP9.57□□□□□ -0.88
LINC00661-204ENST00000549354 COL6A6A6NMZ7 2263 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 H7C1Q1 480 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 SSSCA1O60232 199 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 CLN5O75503 358 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 SCGNO76038 276 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 RAB5AP20339 215 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 NDUFA6P56556 154 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 LSM6P62312 80 aaKnown RBP9.57□□□□□ -0.88
LINC00661-204ENST00000549354 CEACAM16Q2WEN9 425 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 TMEM268Q5VZI3 342 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 DEFB124Q8NES8 71 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 PRSS33Q8NF86 280 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 ABI3Q9P2A4 366 aa9.57□□□□□ -0.88
LINC00661-204ENST00000549354 C5orf52A6NGY3 159 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 TFF1P04155 84 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 IFNA4P05014 189 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF728P0DKX0 622 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 CTSSP25774 331 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 CLDN15P56746 228 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 HIST1H3AP68431 136 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 ECH1Q13011 328 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 LTC4SQ16873 150 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 HIST2H3PS2Q5TEC6 136 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 ABLIM2Q6H8Q1 611 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF529Q6P280 563 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 HIST2H3AQ71DI3 136 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 SIGLEC12Q96PQ1 595 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 PNRC2Q9NPJ4 139 aaKnown RBP9.56□□□□□ -0.88
LINC00661-204ENST00000549354 SLC7A11Q9UPY5 501 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 KCNIP3Q9Y2W7 256 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 UBE2J1Q9Y385 318 aaPredicted RBP9.56□□□□□ -0.88
LINC00661-204ENST00000549354 MSR1P21757 451 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 MPZP25189 248 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 SNCAP37840 140 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 SLC16A14Q7RTX9 510 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 PRRG4Q9BZD6 226 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 C19orf12Q9NSK7 152 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF716A6NP11 495 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 MSTNO14793 375 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 DHHO43323 396 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 NBL1P41271 181 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 GLP1RP43220 463 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 ACTBL2Q562R1 376 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 SPINK9Q5DT21 86 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 CXorf67Q86X51 503 aaPredicted RBP9.56□□□□□ -0.88
LINC00661-204ENST00000549354 MDS2Q8NDY4 140 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 OR2V1Q8NHB1 315 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 ZNF703Q9H7S9 590 aaPredicted RBP9.56□□□□□ -0.88
LINC00661-204ENST00000549354 ASCL3Q9NQ33 180 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 DNAJB11Q9UBS4 358 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 ANXA10Q9UJ72 324 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 KPTNQ9Y664 436 aa9.56□□□□□ -0.88
LINC00661-204ENST00000549354 ASH1LQ9NR48 2969 aaKnown RBP9.55□□□□□ -0.88
LINC00661-204ENST00000549354 WRBO00258 174 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 MT-ND4LP03901 98 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 OR8U8P0C7N1 319 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 GPM6AP51674 278 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 CARD18P57730 90 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 HERV-K104P61576 105 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 PPA1Q15181 289 aa9.55□□□□□ -0.88
LINC00661-204ENST00000549354 SOHLH1Q5JUK2 328 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms