RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SSX2Q16385 188 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 LRRC75BQ2VPJ9 315 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 ACSM3Q53FZ2 586 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 LDLRAD2Q5SZI1 272 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 RNLSQ5VYX0 342 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 AWAT2Q6E213 333 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 DHRS7BQ6IAN0 325 aaPredicted RBP12.8□□□□□ -0.36
DDX54-205ENST00000548786 BRICD5Q6PL45 260 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 GLIPR1L1Q6UWM5 242 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 ASCL4Q6XD76 172 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 OR4D6Q8NGJ1 314 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 OR51T1Q8NGJ9 327 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 PLPPR1Q8TBJ4 325 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 SLITRK2Q9H156 845 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 TMEM133Q9H2Q1 129 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 GAL3ST2Q9H3Q3 398 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 KIF25Q9UIL4 384 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 FOXJ3Q9UPW0 622 aa12.8□□□□□ -0.36
DDX54-205ENST00000548786 ODF3BA8MYP8 253 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 GPX5O75715 221 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 CSN2P05814 226 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 CD1AP06126 327 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 MAPK3P27361 379 aaPredicted RBP12.79□□□□□ -0.36
DDX54-205ENST00000548786 RAB13P51153 203 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 SRSF4Q08170 494 aaKnown RBP12.79□□□□□ -0.36
DDX54-205ENST00000548786 FAM189A2Q15884 450 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 RBM48Q5RL73 367 aaKnown RBP12.79□□□□□ -0.36
DDX54-205ENST00000548786 ATAD3CQ5T2N8 411 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 GDPGP1Q6ZNW5 385 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 CEACAM19Q7Z692 300 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 SUMF2Q8NBJ7 301 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 OR4F5Q8NH21 305 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 OR5R1Q8NH85 324 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 NDNFQ8TB73 568 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 NEK7Q8TDX7 302 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 UFD1Q92890 307 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 DPCDQ9BVM2 203 aaPredicted RBP12.79□□□□□ -0.36
DDX54-205ENST00000548786 BANF2Q9H503 90 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 DUSP21Q9H596 190 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 IL36GQ9NZH8 169 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 HILPDAQ9Y5L2 63 aa12.79□□□□□ -0.36
DDX54-205ENST00000548786 IGHV3-7P01780 117 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 NFYBP25208 207 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 VHLP40337 213 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 RPS25P62851 125 aaKnown RBP12.78□□□□□ -0.36
DDX54-205ENST00000548786 LTC4SQ16873 150 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 UTF1Q5T230 341 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 ZNF626Q68DY1 528 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 OR11H6Q8NGC7 330 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 OR13A1Q8NGR1 328 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 FAM46BQ96A09 425 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 FOXRED1Q96CU9 486 aaPredicted RBP12.78□□□□□ -0.36
DDX54-205ENST00000548786 ZNF747Q9BV97 191 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 CLEC7AQ9BXN2 247 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 BEX1Q9HBH7 125 aa12.78□□□□□ -0.36
DDX54-205ENST00000548786 CRTAPO75718 401 aaPredicted RBP12.77□□□□□ -0.37
DDX54-205ENST00000548786 GTF2F2P13984 249 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 GP2P55259 537 aaKnown RBP12.77□□□□□ -0.37
DDX54-205ENST00000548786 RBM39Q14498 530 aaKnown RBP12.77□□□□□ -0.37
DDX54-205ENST00000548786 RSBN1Q5VWQ0 802 aaPredicted RBP12.77□□□□□ -0.37
DDX54-205ENST00000548786 Q6ZSV7 163 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 ABHD12Q8N2K0 398 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 Q8NFD4 153 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 CORO2AQ92828 525 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 CYYR1Q96J86 154 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 BARHL1Q9BZE3 327 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 ZNF286AQ9HBT8 521 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 TCF7L1Q9HCS4 588 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 OR6C3Q9NZP0 311 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 RAB26Q9ULW5 256 aa12.77□□□□□ -0.37
DDX54-205ENST00000548786 TBL2Q9Y4P3 447 aaKnown RBP12.77□□□□□ -0.37
DDX54-205ENST00000548786 FAM90A8PA6NJQ4 464 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 ZNF780AO75290 641 aaPredicted RBP12.76□□□□□ -0.37
DDX54-205ENST00000548786 NDUFA7O95182 113 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 SSTR5P35346 364 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 C17orf58Q2M2W7 97 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 OLFML2AQ68BL7 652 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 HEPN1Q6WQI6 88 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 PRSS48Q7RTY5 328 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 TMEM219Q86XT9 240 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 MS4A15Q8N5U1 240 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 NKAIN3Q8N8D7 197 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 TMEM104Q8NE00 496 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 RFESDQ8TAC1 157 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 UBALD1Q8TB05 177 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 CCDC107Q8WV48 283 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 THRSPQ92748 146 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 LEAP2Q969E1 77 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 SELENOIQ9C0D9 397 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 MEGF9Q9H1U4 602 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 KCNK15Q9H427 330 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 ABCB10Q9NRK6 738 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 TAS2R3Q9NYW6 316 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 CALYQ9NYX4 217 aa12.76□□□□□ -0.37
DDX54-205ENST00000548786 CLPSL1A2RUU4 121 aa12.75□□□□□ -0.37
DDX54-205ENST00000548786 ZNF729A6NN14 1252 aaPredicted RBP12.75□□□□□ -0.37
DDX54-205ENST00000548786 CHST1O43916 411 aa12.75□□□□□ -0.37
DDX54-205ENST00000548786 MGMTP16455 207 aa12.75□□□□□ -0.37
DDX54-205ENST00000548786 GPR50Q13585 617 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms