RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 RPS2P15880 293 aaKnown RBP12.7□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF32P17041 273 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 NAAAQ02083 359 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 MALLQ13021 153 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 PRR31Q5SQ13 230 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.7□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF610Q8N9Z0 462 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 SAP25Q8TEE9 199 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 MSTNO14793 375 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 NRASP01111 189 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 CCL3P10147 92 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 RNF212Q495C1 297 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 VAX1Q5SQQ9 334 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 FAHD2BQ6P2I3 314 aaPredicted RBP12.7□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF574Q6ZN55 896 aaPredicted RBP12.7□□□□□ -0.38
HOXC11-202ENST00000546378 TBC1D26Q86UD7 250 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 CALHM1Q8IU99 346 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 DMRTC2Q8IXT2 367 aaPredicted RBP12.7□□□□□ -0.38
HOXC11-202ENST00000546378 LILRB2Q8N423 598 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 GJC3Q8NFK1 279 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 TMEM171Q8WVE6 324 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 FAHD2AQ96GK7 314 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 PTRH2Q9Y3E5 179 aaKnown RBP12.7□□□□□ -0.38
HOXC11-202ENST00000546378 IGKV1-27A0A075B6S5 117 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 ANKUB1A6NFN9 424 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 CXCL13O43927 109 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 HEXAP06865 529 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 OTX2P32243 289 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 UBE2G2P60604 165 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 CST9LP1Q5W188 147 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 ARHGEF39Q8N4T4 335 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 POC1BQ8TC44 478 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 LAMP3Q9UQV4 416 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 MMACHCQ9Y4U1 282 aa12.7□□□□□ -0.38
HOXC11-202ENST00000546378 SPTBN1Q01082 2364 aaKnown RBP12.69□□□□□ -0.38
HOXC11-202ENST00000546378 A0A087X0M5 115 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 A0A1B0GX30 115 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 DHRS3O75911 302 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 KHDC3LQ587J8 217 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF808Q8N4W9 903 aaPredicted RBP12.69□□□□□ -0.38
HOXC11-202ENST00000546378 IFI44Q8TCB0 444 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 RHBDD1Q8TEB9 315 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 DUSP23Q9BVJ7 150 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 KIAA1324LA8MWY0 1029 aaPredicted RBP12.69□□□□□ -0.38
HOXC11-202ENST00000546378 TFF1P04155 84 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 TRGC1P0CF51 173 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 RBP2P50120 134 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 DCAF7P61962 342 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 SLC16A14Q7RTX9 510 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 ANKRD37Q7Z713 158 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 C17orf82Q86X59 251 aaPredicted RBP12.69□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF286AQ9HBT8 521 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 MYOTQ9UBF9 498 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 TIMM10BQ9Y5J6 103 aa12.69□□□□□ -0.38
HOXC11-202ENST00000546378 A0A1B0GUS0 222 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 LOC390937A0A1W2PQ73 354 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 FIGNL2A6NMB9 653 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 SPINK4O60575 86 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 TUSC2O75896 110 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 NR2C1P13056 603 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 PLPPR5Q32ZL2 321 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 WDR5BQ86VZ2 330 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
HOXC11-202ENST00000546378 FGFBP3Q8TAT2 258 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 SYT3Q9BQG1 590 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 CABLES2Q9BTV7 478 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 TAAR5O14804 337 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 SERPINE2P07093 398 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 DANCRP0C864 163 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 FUT3P21217 361 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 COL8A2P25067 703 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 GPX4P36969 197 aaPredicted RBP12.68□□□□□ -0.38
HOXC11-202ENST00000546378 SPTSSAQ969W0 71 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 RASL10BQ96S79 203 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 OR14J1Q9UGF5 321 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 KLF2Q9Y5W3 355 aaPredicted RBP12.68□□□□□ -0.38
HOXC11-202ENST00000546378 IGKV1-12A0A0C4DH73 117 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 C3orf85A0A1B0GTC6 90 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF587BE7ETH6 402 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 UBE2CO00762 179 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 DHHO43323 396 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 IGKV1D-12P01611 117 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 APLNRP35414 380 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 C3AR1Q16581 482 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 CEACAM16Q2WEN9 425 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 FAM53AQ6NSI3 398 aaPredicted RBP12.68□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF611Q8N823 705 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 CCDC74BQ96LY2 380 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 SLC25A22Q9H936 323 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 GLRX2Q9NS18 164 aa12.68□□□□□ -0.38
HOXC11-202ENST00000546378 SMCO3A2RU48 225 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 CRYM-AS1A6NIL9 109 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 ZNF92Q03936 586 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 PRSS8Q16651 343 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 SCGB1C1Q8TD33 95 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 ABHD3Q8WU67 409 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 OCIAD1Q9NX40 245 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 BTBD17A6NE02 478 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST1H2BKO60814 126 aa12.67□□□□□ -0.38
HOXC11-202ENST00000546378 HIST1H2BJP06899 126 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms