RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	ATP5H	O75947	161 aa		18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	CLIC3	O95833	236 aa		18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	IGHV3-7	P01780	117 aa		18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	DBT	P11182	482 aa	Known RBP	18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	MTNR1B	P49286	362 aa		18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	OSR2	Q8N2R0	312 aa		18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	OR51T1	Q8NGJ9	327 aa		18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	MRPL48	Q96GC5	212 aa	Known RBP	18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	NR1H4	Q96RI1	486 aa	Predicted RBP	18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM53C	Q9NYF3	392 aa		18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	KIF25	Q9UIL4	384 aa		18.89	■□□□□ 0.61
RAP1B-233	ENST00000545720	SNTN	A6NMZ2	147 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM106CP	P0CH98	169 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	GALE	Q14376	348 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	ZSCAN26	Q16670	478 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	PAN3	Q58A45	887 aa	Known RBP	18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	ZNF691	Q5VV52	312 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	SERPINA12	Q8IW75	414 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	OR5D14	Q8NGL3	314 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	OR13A1	Q8NGR1	328 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	OR56B4	Q8NH76	319 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	LEAP2	Q969E1	77 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	ISG20L2	Q9H9L3	353 aa	Known RBP	18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	CALY	Q9NYX4	217 aa		18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	18.88	■□□□□ 0.61
RAP1B-233	ENST00000545720	MEIKIN	A0A087WXM9	373 aa		18.87	■□□□□ 0.61
RAP1B-233	ENST00000545720	PSMB11	A5LHX3	300 aa		18.87	■□□□□ 0.61
RAP1B-233	ENST00000545720	ZFPL1	O95159	310 aa		18.87	■□□□□ 0.61
RAP1B-233	ENST00000545720	SNRNP70	P08621	437 aa	Known RBP	18.87	■□□□□ 0.61
RAP1B-233	ENST00000545720	KRTAP10-11	P60412	298 aa		18.87	■□□□□ 0.61
RAP1B-233	ENST00000545720	PARP16	Q8N5Y8	322 aa		18.87	■□□□□ 0.61
RAP1B-233	ENST00000545720	TSEN15	Q8WW01	171 aa	Known RBP	18.87	■□□□□ 0.61
RAP1B-233	ENST00000545720	PDCD1LG2	Q9BQ51	273 aa		18.87	■□□□□ 0.61
RAP1B-233	ENST00000545720	PCDHB16	Q9NRJ7	776 aa		18.87	■□□□□ 0.61
RAP1B-233	ENST00000545720	TRAV24	A0A0B4J272	114 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	TMEM212	A6NML5	194 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720		J3QR06	171 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	DUS4L	O95620	317 aa	Known RBP	18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	CGB3	P0DN86	165 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	CGB7	P0DN87	165 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	HES1	Q14469	280 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	LTC4S	Q16873	150 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	ZNF329	Q86UD4	541 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	SYS1	Q8N2H4	156 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	DRAM1	Q8N682	238 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	ZNF565	Q8N9K5	539 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	OR5AK2	Q8NH90	309 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	ZNF649	Q9BS31	505 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	IDI2-AS1	Q9NZ38	188 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720	DHDH	Q9UQ10	334 aa		18.86	■□□□□ 0.61
RAP1B-233	ENST00000545720		A0A1W2PPI3	338 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	WI2-2373I1.2	A0A1W2PRP0	233 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720		E9PI62	339 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720		E9PQ18	207 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	HOXD3	P31249	432 aa	Predicted RBP	18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	GNG10	P50151	68 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	ALDH3A2	P51648	485 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	ELP2	Q6IA86	826 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	SATL1	Q86VE3	508 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	THNSL2	Q86YJ6	484 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	LINC00482	Q8N8I6	264 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	CNIH3	Q8TBE1	160 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	MRGPRD	Q8TDS7	321 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	MYCBP	Q99417	103 aa	Predicted RBP	18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	GPER1	Q99527	375 aa		18.85	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM90A18P	A6NE21	464 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM90A16P	A6NEW6	464 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM90A20P	A6NIJ5	464 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM90A9P	A6NNJ1	464 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM90A12P	A8MX19	464 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM90A5P	A8MXJ8	464 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	IL1A	P01583	271 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM90A15P	P0C7V4	464 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM90A13P	P0C7W8	464 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM90A14P	P0C7W9	464 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM90A24P	P0C7X0	464 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	TMEM11	P17152	192 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	C21orf33	P30042	268 aa	Predicted RBP	18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	MADCAM1	Q13477	382 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	DIAPH2-AS1	Q14236	149 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	PIGY	Q3MUY2	71 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	DEFB121	Q5J5C9	76 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	PXT1	Q8NFP0	134 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	OR51A2	Q8NGJ7	313 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	OR10K1	Q8NGX5	313 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	TNFAIP8L1	Q8WVP5	186 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	NOL4L	Q96MY1	436 aa	Predicted RBP	18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	BARHL1	Q9BZE3	327 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	FAM192A	Q9GZU8	254 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	AMBN	Q9NP70	447 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	PSG11	Q9UQ72	335 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	GMPPB	Q9Y5P6	360 aa		18.84	■□□□□ 0.61
RAP1B-233	ENST00000545720	GABRP	O00591	440 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	RPSA	P08865	295 aa	Known RBP	18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	CCDC159	P0C7I6	412 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	GABRB1	P18505	474 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	RAB3A	P20336	220 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	SSTR5	P35346	364 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	HNF4G	Q14541	408 aa		18.83	■□□□□ 0.6
RAP1B-233	ENST00000545720	VAX1	Q5SQQ9	334 aa		18.83	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms