RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ADIPOQQ15848 244 aa16.71■□□□□ 0.27
COPS7A-218ENST00000543939 GAPTQ8N292 157 aa16.71■□□□□ 0.27
COPS7A-218ENST00000543939 PRR7Q8TB68 274 aa16.71■□□□□ 0.27
COPS7A-218ENST00000543939 PLPPR1Q8TBJ4 325 aa16.71■□□□□ 0.27
COPS7A-218ENST00000543939 MITD1Q8WV92 249 aa16.71■□□□□ 0.27
COPS7A-218ENST00000543939 TMPRSS13Q9BYE2 586 aa16.71■□□□□ 0.27
COPS7A-218ENST00000543939 RASL12Q9NYN1 266 aa16.71■□□□□ 0.27
COPS7A-218ENST00000543939 OR14J1Q9UGF5 321 aa16.71■□□□□ 0.27
COPS7A-218ENST00000543939 ICE1Q9Y2F5 2266 aa16.71■□□□□ 0.27
COPS7A-218ENST00000543939 COL6A6A6NMZ7 2263 aa16.71■□□□□ 0.26
COPS7A-218ENST00000543939 KIR2DS1A0A191URI9 304 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 ZNF205O95201 554 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 IGHV1-46P01743 117 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 PGAM2P15259 253 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 CD34P28906 385 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 FCGR2CP31995 323 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 KIR2DS4P43632 304 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 GATA4P43694 442 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 CEBPDP49716 269 aaPredicted RBP16.7■□□□□ 0.26
COPS7A-218ENST00000543939 KIR2DS1Q14954 304 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 SMIM21Q3B7S5 101 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 IGSF11Q5DX21 431 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 ADAM5Q6NVV9 412 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 ITLN1Q8WWA0 313 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 ESRP2Q9H6T0 727 aaKnown RBP16.7■□□□□ 0.26
COPS7A-218ENST00000543939 SLC23A1Q9UHI7 598 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 ZDHHC8Q9ULC8 765 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 ITPR1Q14643 2758 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 SRRM5B3KS81 715 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 GOSR2O14653 212 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 SLC22A5O76082 557 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 DUS4LO95620 317 aaKnown RBP16.7■□□□□ 0.26
COPS7A-218ENST00000543939 SCTP09683 121 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 OR4A8P0C604 315 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 EGR1P18146 543 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 VAMP1P23763 118 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 GLP1RP43220 463 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 CDSNQ15517 529 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 ZNF497Q6ZNH5 498 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 C5orf24Q7Z6I8 188 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 MOGAT3Q86VF5 341 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 HYLS1Q96M11 299 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 CHIAQ9BZP6 476 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 FXYD6Q9H0Q3 95 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 RANBP3Q9H6Z4 567 aaPredicted RBP16.7■□□□□ 0.26
COPS7A-218ENST00000543939 PKD1L2Q7Z442 2459 aa16.7■□□□□ 0.26
COPS7A-218ENST00000543939 SHISA9B4DS77 424 aa16.69■□□□□ 0.26
COPS7A-218ENST00000543939 G3V3Q6 166 aa16.69■□□□□ 0.26
COPS7A-218ENST00000543939 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.69■□□□□ 0.26
COPS7A-218ENST00000543939 H7C1Q1 480 aa16.69■□□□□ 0.26
COPS7A-218ENST00000543939 CTSDP07339 412 aaPredicted RBP16.69■□□□□ 0.26
COPS7A-218ENST00000543939 GRNP28799 593 aaKnown RBP16.69■□□□□ 0.26
COPS7A-218ENST00000543939 RBMXP38159 391 aaKnown RBP16.69■□□□□ 0.26
COPS7A-218ENST00000543939 H2BFSP57053 126 aa16.69■□□□□ 0.26
COPS7A-218ENST00000543939 RAP2BP61225 183 aa16.69■□□□□ 0.26
COPS7A-218ENST00000543939 SNTB1Q13884 538 aaKnown RBP16.69■□□□□ 0.26
COPS7A-218ENST00000543939 HERPUD1Q15011 391 aa16.69■□□□□ 0.26
COPS7A-218ENST00000543939 DMRTC2Q8IXT2 367 aaPredicted RBP16.69■□□□□ 0.26
COPS7A-218ENST00000543939 PLPPR2Q96GM1 343 aa16.69■□□□□ 0.26
COPS7A-218ENST00000543939 NDRG3Q9UGV2 375 aa16.69■□□□□ 0.26
COPS7A-218ENST00000543939 IL19Q9UHD0 177 aa16.69■□□□□ 0.26
COPS7A-218ENST00000543939 ERRFI1Q9UJM3 462 aaPredicted RBP16.69■□□□□ 0.26
COPS7A-218ENST00000543939 C14orf166Q9Y224 244 aaKnown RBP16.69■□□□□ 0.26
COPS7A-218ENST00000543939 FAM172BPA6NC97 362 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 IFNL4K9M1U5 179 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 PSPNO60542 156 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 SIX6O95475 246 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 SFT2D2O95562 160 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 RCC1P18754 421 aaPredicted RBP16.68■□□□□ 0.26
COPS7A-218ENST00000543939 SUPT4H1P63272 117 aaKnown RBP16.68■□□□□ 0.26
COPS7A-218ENST00000543939 TNFAIP6P98066 277 aaPredicted RBP16.68■□□□□ 0.26
COPS7A-218ENST00000543939 FAM90A1Q86YD7 464 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 GCSAMQ8N6F7 178 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 OR2T35Q8NGX2 323 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 LINC01560Q8TB33 94 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 ZFAND1Q8TCF1 268 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 MOB3AQ96BX8 217 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 WDR89Q96FK6 387 aaPredicted RBP16.68■□□□□ 0.26
COPS7A-218ENST00000543939 PHB2Q99623 299 aa16.68■□□□□ 0.26
COPS7A-218ENST00000543939 TPRP12270 2363 aaKnown RBP16.68■□□□□ 0.26
COPS7A-218ENST00000543939 IGKV1-6A0A0C4DH72 117 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 RFPL4AA6NLU0 287 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 RFPL4AL1F8VTS6 287 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 LHBP01229 141 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 ADH4P08319 380 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 CTXN2P0C2S0 81 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 RPS2P15880 293 aaKnown RBP16.67■□□□□ 0.26
COPS7A-218ENST00000543939 UCP3P55916 312 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 HLA-DRB3P79483 266 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 SORDQ00796 357 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 ATXN7L3Q14CW9 347 aaPredicted RBP16.67■□□□□ 0.26
COPS7A-218ENST00000543939 LY6G6FQ5SQ64 297 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 DCAF12L2Q5VW00 463 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 MOB1BQ7L9L4 216 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 OR11H4Q8NGC9 324 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 CASTOR1Q8WTX7 329 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 CA5BP1Q8WTZ4 195 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 LRRC46Q96FV0 321 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 ZNF728P0DKX0 622 aa16.67■□□□□ 0.26
COPS7A-218ENST00000543939 HLA-GP17693 338 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms