RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 GPX2P18283 190 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 PSG9Q00887 426 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
VPS13D-212ENST00000543766 ZNF429Q86V71 674 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 KIR2DL5BQ8NHK3 375 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 OCC1Q8TAD7 63 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 FAM213BQ8TBF2 198 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 STARD4Q96DR4 205 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 ZNF319Q9P2F9 582 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 OR1I1O60431 355 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 APODP05090 189 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 FTH1P19P0C7X4 201 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 ERGP11308 486 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 FCGR2BP31994 310 aaPredicted RBP7.75□□□□□ -1.17
VPS13D-212ENST00000543766 GDF5P43026 501 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 OR1E2P47887 323 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 RABGGTBP53611 331 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 KRTDAPP60985 99 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 SNRPGP62308 76 aaKnown RBP7.75□□□□□ -1.17
VPS13D-212ENST00000543766 CLEC12BQ2HXU8 276 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 ACOT6Q3I5F7 207 aaPredicted RBP7.75□□□□□ -1.17
VPS13D-212ENST00000543766 FAM174BQ3ZCQ3 159 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 TIMM23BQ5SRD1 257 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 DHRS13Q6UX07 377 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 HRCT1Q6UXD1 115 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 OR52P1PQ8NH57 321 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 HIST1H2AAQ96QV6 131 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 GCM1Q9NP62 436 aa7.75□□□□□ -1.17
VPS13D-212ENST00000543766 TEX48A0A1B0GUV7 120 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 FABP5P3A8MUU1 101 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 KIR2DS3K7RE56 304 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 SH2D1BO14796 132 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 KIR2DS3Q14952 304 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 AGERQ15109 404 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 PLK5Q496M5 336 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 LRRC10Q5BKY1 277 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 TEX29Q8N6K0 151 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 ZDHHC22Q8N966 263 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 GMPPAQ96IJ6 420 aaPredicted RBP7.74□□□□□ -1.17
VPS13D-212ENST00000543766 OR10C1Q96KK4 312 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 SLC25A51Q9H1U9 297 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 CHST8Q9H2A9 424 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 NRN1Q9NPD7 142 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 RLIMQ9NVW2 624 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 BOKQ9UMX3 212 aaPredicted RBP7.74□□□□□ -1.17
VPS13D-212ENST00000543766 KBTBD11-OT1A0A1B0GTJ5 212 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 A0A1W2PR80 420 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 OR4C46A6NHA9 309 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 ATP5LO75964 103 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 IGFBP2P18065 325 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 OR1D4P47884 311 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 ATP5G2Q06055 141 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 SLC25A52Q3SY17 297 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 ARTNQ5T4W7 220 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 FGF11Q92914 225 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 GPR82Q96P67 336 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 PAAF1Q9BRP4 392 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 SAMD10Q9BYL1 202 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 REEP1Q9H902 201 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 IL17CQ9P0M4 197 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 TMEM8BA6NDV4 472 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 FAM72CH0Y354 149 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 CLDN5O00501 218 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 LATO43561 262 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 OR2A4O95047 310 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 PTGER1P34995 402 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 FAM72AQ5TYM5 149 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 FAM72DQ6L9T8 149 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 FAM72BQ86X60 149 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 KLHDC8AQ8IYD2 350 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 OSR2Q8N2R0 312 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 KLK6Q92876 244 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 DUX3Q96PT4 197 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 OR2A7Q96R45 310 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 RNASE7Q9H1E1 156 aaKnown RBP7.74□□□□□ -1.17
VPS13D-212ENST00000543766 OR52D1Q9H346 318 aa7.74□□□□□ -1.17
VPS13D-212ENST00000543766 RBM22Q9NW64 420 aaKnown RBP eCLIP7.74□□□□□ -1.17
VPS13D-212ENST00000543766 IDSB3KWA1 339 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CT45A6P0DMU7 189 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CT45A5P0DMU8 189 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CT45A10P0DMU9 189 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CT45A7P0DMV0 189 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CD99P14209 185 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CCR2P41597 374 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 MANFP55145 182 aaKnown RBP7.73□□□□□ -1.17
VPS13D-212ENST00000543766 RUNX1Q01196 453 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 MEF2CQ06413 473 aaPredicted RBP7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CT45A1Q5HYN5 189 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CT45A3Q8NHU0 189 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 ULBP3Q9BZM4 244 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CACFD1Q9UGQ2 172 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 HTTP42858 3142 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 A0A1W2PQF6 199 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 SHISA3A0PJX4 238 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 SOD1P00441 154 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 CXCL1P09341 107 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 RPL8P62917 257 aaKnown RBP7.73□□□□□ -1.17
VPS13D-212ENST00000543766 RAE1P78406 368 aaKnown RBP7.73□□□□□ -1.17
VPS13D-212ENST00000543766 C4orf26Q17RF5 130 aa7.73□□□□□ -1.17
VPS13D-212ENST00000543766 MPV17LQ2QL34 196 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms