RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 HIST1H3AP68431 136 aa20.46■□□□□ 0.87
SHD-201ENST00000543264 ZNF124Q15973 351 aa20.46■□□□□ 0.87
SHD-201ENST00000543264 SSX2Q16385 188 aa20.46■□□□□ 0.87
SHD-201ENST00000543264 SLC25A24Q6NUK1 477 aa20.46■□□□□ 0.87
SHD-201ENST00000543264 TMEM56Q96MV1 263 aa20.46■□□□□ 0.87
SHD-201ENST00000543264 TMEM56-RWDD3S4R434 201 aa20.46■□□□□ 0.87
SHD-201ENST00000543264 WDR87Q6ZQQ6 2873 aa20.46■□□□□ 0.87
SHD-201ENST00000543264 TERTO14746 1132 aaKnown RBP20.46■□□□□ 0.87
SHD-201ENST00000543264 TNFSF12O43508 249 aa20.46■□□□□ 0.87
SHD-201ENST00000543264 C10orf128Q5T292 105 aa20.46■□□□□ 0.87
SHD-201ENST00000543264 ZNF385CQ66K41 422 aaPredicted RBP20.46■□□□□ 0.87
SHD-201ENST00000543264 LOC102725191A0A1B0GVB3 256 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 LMO7DNF2Z398 122 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 PDCD6O75340 191 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 LCATP04180 440 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 TCN2P20062 427 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 TAS2R30P59541 319 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 OR5L2Q8NGL0 311 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 CABLES2Q9BTV7 478 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 MYOTQ9UBF9 498 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 EML6Q6ZMW3 1958 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 IGLV3-32A0A0A0MS00 114 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 A0A1B0GU03 582 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 OR7C1O76099 320 aaPredicted RBP20.45■□□□□ 0.86
SHD-201ENST00000543264 NRASP01111 189 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 HLA-HP01893 362 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 LHFPL2Q6ZUX7 228 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 C7orf61Q8IZ16 206 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 TMEM54Q969K7 222 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 SIGLEC12Q96PQ1 595 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 ATP5SQ99766 215 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 CA14Q9ULX7 337 aa20.45■□□□□ 0.86
SHD-201ENST00000543264 C9J4A7 227 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 H3BP45 60 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 CYB5R3P00387 301 aaPredicted RBP20.44■□□□□ 0.86
SHD-201ENST00000543264 CEACAM1P13688 526 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 RND2P52198 227 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 ID3Q02535 119 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 UCN2Q96RP3 112 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 CLEC1BQ9P126 229 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 PITPNC1Q9UKF7 332 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 MTCH2Q9Y6C9 303 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 NPIPA2E9PIF3 369 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 NPIPA3F8WFD2 350 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 BAXQ07812 192 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 USF2Q15853 346 aaPredicted RBP20.44■□□□□ 0.86
SHD-201ENST00000543264 LCN15Q6UWW0 184 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 ASCL4Q6XD76 172 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 ZNF818PQ6ZRF7 136 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 FAM185AQ8N0U4 392 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 ZNF665Q9H7R5 613 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 LRFN1Q9P244 771 aa20.44■□□□□ 0.86
SHD-201ENST00000543264 DUX1O43812 170 aa20.43■□□□□ 0.86
SHD-201ENST00000543264 EXT1Q16394 746 aa20.43■□□□□ 0.86
SHD-201ENST00000543264 TMEM211Q6ICI0 200 aa20.43■□□□□ 0.86
SHD-201ENST00000543264 GAPTQ8N292 157 aa20.43■□□□□ 0.86
SHD-201ENST00000543264 OR5R1Q8NH85 324 aa20.43■□□□□ 0.86
SHD-201ENST00000543264 RCC1LQ96I51 464 aaKnown RBP20.43■□□□□ 0.86
SHD-201ENST00000543264 ULBP2Q9BZM5 246 aa20.43■□□□□ 0.86
SHD-201ENST00000543264 CFAP54Q96N23 3096 aa20.43■□□□□ 0.86
SHD-201ENST00000543264 ZNF774Q6NX45 483 aa20.43■□□□□ 0.86
SHD-201ENST00000543264 CABIN1Q9Y6J0 2220 aa20.43■□□□□ 0.86
SHD-201ENST00000543264 FGF8P55075 233 aaPredicted RBP20.42■□□□□ 0.86
SHD-201ENST00000543264 PNRC1Q12796 327 aaPredicted RBP20.42■□□□□ 0.86
SHD-201ENST00000543264 OR10G4Q8NGN3 311 aa20.42■□□□□ 0.86
SHD-201ENST00000543264 LURAP1Q96LR2 239 aa20.42■□□□□ 0.86
SHD-201ENST00000543264 TMEM242Q9NWH2 141 aa20.42■□□□□ 0.86
SHD-201ENST00000543264 A0A1W2PR77 199 aa20.42■□□□□ 0.86
SHD-201ENST00000543264 TGOLN2O43493 480 aa20.42■□□□□ 0.86
SHD-201ENST00000543264 ZFAND5O76080 213 aa20.42■□□□□ 0.86
SHD-201ENST00000543264 RPS18P62269 152 aaKnown RBP20.42■□□□□ 0.86
SHD-201ENST00000543264 ZFP36L1Q07352 338 aaKnown RBP20.42■□□□□ 0.86
SHD-201ENST00000543264 PLPPR1Q8TBJ4 325 aa20.42■□□□□ 0.86
SHD-201ENST00000543264 GPR87Q9BY21 358 aa20.42■□□□□ 0.86
SHD-201ENST00000543264 DKKL1Q9UK85 242 aa20.42■□□□□ 0.86
SHD-201ENST00000543264 PTRH2Q9Y3E5 179 aaKnown RBP20.42■□□□□ 0.86
SHD-201ENST00000543264 PATE4P0C8F1 98 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 MMP9P14780 707 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 PAX9P55771 341 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 H3F3AP84243 136 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 IL24Q13007 206 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 NMSQ5H8A3 153 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 DPPA3Q6W0C5 159 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 WDR5BQ86VZ2 330 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 OR4X1Q8NH49 305 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 RSG1Q9BU20 258 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 SDF2L1Q9HCN8 221 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 PLSCR2Q9NRY7 297 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 RPRMQ9NS64 109 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 IFNA5P01569 189 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 GZMBP10144 247 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 BCL2P10415 239 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 VDAC1P21796 283 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 HNRNPKP61978 463 aaKnown RBP eCLIP20.41■□□□□ 0.86
SHD-201ENST00000543264 JOSD1Q15040 202 aaPredicted RBP20.41■□□□□ 0.86
SHD-201ENST00000543264 NKAIN1Q4KMZ8 207 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 ZNF787Q6DD87 383 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 FAM180AQ6UWF9 173 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 FOXL2NBQ6ZUU3 175 aa20.41■□□□□ 0.86
SHD-201ENST00000543264 VSIRQ9H7M9 311 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms