RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 FAM90A10PA6NDY2 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A18PA6NE21 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A16PA6NEW6 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM24AA6NFZ4 105 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A20PA6NIJ5 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A8PA6NJQ4 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A7PA6NKC0 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 A6NLC8 198 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A22PA8MWA6 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A12PA8MX19 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A5PA8MXJ8 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A23PA8MXZ1 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 MMP7P09237 267 aaPredicted RBP14.27□□□□□ -0.13
KDM2B-216ENST00000543025 RFPL3SP0C7P2 107 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A15PP0C7V4 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A13PP0C7W8 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A14PP0C7W9 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 FAM90A24PP0C7X0 464 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 SULT1A1P50225 295 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 ASCL1P50553 236 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 Q6ZS49 121 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 TBC1D26Q86UD7 250 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 BATF2Q8N1L9 274 aa14.27□□□□□ -0.13
KDM2B-216ENST00000543025 UBE2J1Q9Y385 318 aaPredicted RBP14.27□□□□□ -0.13
KDM2B-216ENST00000543025 MED19A0JLT2 244 aaPredicted RBP14.26□□□□□ -0.13
KDM2B-216ENST00000543025 PITX3O75364 302 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 DAOP14920 347 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 CLINT1Q14677 625 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 TGIF1Q15583 401 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 SPIN3Q5JUX0 258 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 DEFB124Q8NES8 71 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 Q8NFD4 153 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 EXTL1Q92935 676 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 SDK2Q58EX2 2172 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 TRAPPC6AO75865 159 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 TK1P04183 234 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 ZNF14P17017 642 aaPredicted RBP14.26□□□□□ -0.13
KDM2B-216ENST00000543025 RAB5AP20339 215 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 POLR2GP62487 172 aaKnown RBP eCLIP14.26□□□□□ -0.13
KDM2B-216ENST00000543025 SRSF7Q16629 238 aaKnown RBP eCLIP14.26□□□□□ -0.13
KDM2B-216ENST00000543025 WIPI1Q5MNZ9 446 aaPredicted RBP14.26□□□□□ -0.13
KDM2B-216ENST00000543025 PAPOLGQ9BWT3 736 aaKnown RBP14.26□□□□□ -0.13
KDM2B-216ENST00000543025 PLEKHF2Q9H8W4 249 aa14.26□□□□□ -0.13
KDM2B-216ENST00000543025 LYRM2Q9NU23 88 aaPredicted RBP14.26□□□□□ -0.13
KDM2B-216ENST00000543025 A0A1B0GV50 99 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 IGSF23A1L1A6 192 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 LRRC3CA6NJW4 275 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 SMIM6P0DI80 62 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 OR13C7P0DN81 318 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 ATP6V0CP27449 155 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 RND3P61587 244 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 ZFP36L1Q07352 338 aaKnown RBP14.25□□□□□ -0.13
KDM2B-216ENST00000543025 TRIP6Q15654 476 aaKnown RBP14.25□□□□□ -0.13
KDM2B-216ENST00000543025 ZNF565Q8N9K5 539 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 OR2G3Q8NGZ4 309 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 ABHD3Q8WU67 409 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 CPNE4Q96A23 557 aaPredicted RBP14.25□□□□□ -0.13
KDM2B-216ENST00000543025 ABHD14BQ96IU4 210 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 SLC25A31Q9H0C2 315 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 RYDENQ9NUL5 291 aaKnown RBP14.25□□□□□ -0.13
KDM2B-216ENST00000543025 DMXL1Q9Y485 3027 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 SHANK1Q9Y566 2161 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 CYTIPO60759 359 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 CLDN15P56746 228 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 RAB1AP62820 205 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 NRN1LQ496H8 165 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 CPEB3Q8NE35 698 aaKnown RBP14.25□□□□□ -0.13
KDM2B-216ENST00000543025 Q9N2K0 584 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 PCNX2A6NKB5 2137 aa14.25□□□□□ -0.13
KDM2B-216ENST00000543025 SSSCA1O60232 199 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 S100A9P06702 114 aaKnown RBP14.24□□□□□ -0.13
KDM2B-216ENST00000543025 CDCP2Q5VXM1 449 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 ZNF818PQ6ZRF7 136 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 COLCA1Q6ZS62 124 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 SELENOHQ8IZQ5 122 aaKnown RBP14.24□□□□□ -0.13
KDM2B-216ENST00000543025 FAM24BQ8N5W8 94 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 OR8G5Q8NG78 346 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 NCKAP5O14513 1909 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 DUXBA0A1W2PPF3 345 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 GPR37O15354 613 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 IGHEP01854 428 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 CBR1P16152 277 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 BCL3P20749 454 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 VAMP2P63027 116 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 SOHLH1Q5JUK2 328 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 TMEM252Q8N6L7 170 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 SUMF2Q8NBJ7 301 aa14.24□□□□□ -0.13
KDM2B-216ENST00000543025 ZNF845Q96IR2 970 aaPredicted RBP14.24□□□□□ -0.13
KDM2B-216ENST00000543025 RIF1Q5UIP0 2472 aaKnown RBP14.24□□□□□ -0.13
KDM2B-216ENST00000543025 hCG_1809904A0A1W2PP81 198 aa14.23□□□□□ -0.13
KDM2B-216ENST00000543025 A0A1W2PPE2 198 aa14.23□□□□□ -0.13
KDM2B-216ENST00000543025 A0A1W2PR64 198 aa14.23□□□□□ -0.13
KDM2B-216ENST00000543025 A0A1W2PRV1 198 aa14.23□□□□□ -0.13
KDM2B-216ENST00000543025 ZNF724A8MTY0 619 aa14.23□□□□□ -0.13
KDM2B-216ENST00000543025 HSPA12AO43301 675 aa14.23□□□□□ -0.13
KDM2B-216ENST00000543025 ADAM20O43506 726 aa14.23□□□□□ -0.13
KDM2B-216ENST00000543025 NAPSAO96009 420 aa14.23□□□□□ -0.13
KDM2B-216ENST00000543025 ARG1P05089 322 aa14.23□□□□□ -0.13
KDM2B-216ENST00000543025 HAAOP46952 286 aa14.23□□□□□ -0.13
KDM2B-216ENST00000543025 FGF12P61328 243 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms