RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 WDR5BQ86VZ2 330 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 SAXO1Q8IYX7 474 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM185AQ8N0U4 392 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 CCDC71LQ8N9Z2 235 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 CLEC18CQ8NCF0 446 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 OR52M1Q8NGK5 317 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 OR11L1Q8NGX0 322 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 OR10D3Q8NH80 312 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 ABHD14BQ96IU4 210 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM56Q96MV1 263 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 TAAR9Q96RI9 348 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 SMIM3Q9BZL3 60 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 LUZP4Q9P127 313 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 SLC7A11Q9UPY5 501 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 RCL1Q9Y2P8 373 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 R4GN57 208 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM56-RWDD3S4R434 201 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 DCHS1Q96JQ0 3298 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 PI4KAP42356 2102 aa4.47□□□□□ -1.69
ATPAF1-212ENST00000542495 COL27A1Q8IZC6 1860 aaPredicted RBP4.46□□□□□ -1.69
ATPAF1-212ENST00000542495 NCKAP5O14513 1909 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 B4E171 279 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 TRDCB7Z8K6 153 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 RPL36A-HNRNPH2H7BZ11 118 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 AGPAT2O15120 278 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 MPPED1O15442 326 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 SS18L1O75177 396 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF205O95201 554 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 DIRAS3O95661 229 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 TSPAN15O95858 294 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 NAPSAO96009 420 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 PPYP01298 95 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 P04436 131 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 THBDP07204 575 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 RFPL3SP0C7P2 107 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 SP9P0CG40 484 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 GNRHRP30968 328 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 TSPAN7P41732 249 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 GLP1RP43220 463 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 FXYD4P59646 89 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 SRPXP78539 464 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 EWSR1Q01844 656 aaKnown RBP eCLIP4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 NHLH2Q02577 135 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 GUK1Q16774 197 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 PLCXD3Q63HM9 321 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 CLEC9AQ6UXN8 241 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 FBXW12Q6X9E4 464 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 CALHM1Q8IU99 346 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 SLC35G3Q8N808 338 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 CPEB3Q8NE35 698 aaKnown RBP4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 OR8G5Q8NG78 346 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 OR5L1Q8NGL2 311 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 OR14L1PQ8NHC6 308 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 SFT2D1Q8WV19 159 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 SECTM1Q8WVN6 248 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 HIST1H2BAQ96A08 127 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 BOD1Q96IK1 185 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 AKR1E2Q96JD6 320 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 ALKBH3Q96Q83 286 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 TP53RKQ96S44 253 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 LINC00470Q9BZP3 86 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 FGF23Q9GZV9 251 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 TMEM222Q9H0R3 208 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 HIPK2Q9H2X6 1198 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 SMDT1Q9H4I9 107 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 Q9N2K0 584 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 C19orf12Q9NSK7 152 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 DEPPQ9NTK1 212 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 PCSK5Q92824 1860 aa4.46□□□□□ -1.7
ATPAF1-212ENST00000542495 C3orf85A0A1B0GTC6 90 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 DUXBA0A1W2PPF3 345 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 C7orf77A4D0Y5 90 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PINLYPA6NC86 204 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 NKX2-6A6NCS4 301 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PHF1O43189 567 aaPredicted RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 LAMTOR5O43504 91 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 NME2P1O60361 137 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 TUSC2O75896 110 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 MT-ND4LP03901 98 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 COX5BP10606 129 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 MMP9P14780 707 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 AGAP20933 346 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PTAFRP25105 342 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 MAS1LP35410 378 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 RPL35P42766 123 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 NPBWR2P48146 333 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 CAMLGP49069 296 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 FHITP49789 147 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PPT1P50897 306 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 DUSP3P51452 185 aaPredicted RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 HERV-K104P61576 105 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 FOXO1Q12778 655 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 TESK1Q15569 626 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 TMEM177Q53S58 311 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 IGSF11Q5DX21 431 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 ETV3LQ6ZN32 361 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SELENOHQ8IZQ5 122 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF611Q8N823 705 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 LFNGQ8NES3 379 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms